Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_10208 |
Symbol | |
ID | 5220871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | - |
Start bp | 244802 |
End bp | 247636 |
Gene Length | 2835 bp |
Protein Length | 944 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640604948 |
Product | transmembrane transport protein mmpL3 |
Protein accession | YP_001286153 |
Protein GI | 148821399 |
COG category | [R] General function prediction only |
COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 145 |
Plasmid unclonability p-value | 0.0021573 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 191 |
Fosmid unclonability p-value | 0.454475 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTTCGCCT GGTGGGGTCG AACTGTGTAC CGCTACCGGT TCATCGTAAT CGGGGTCATG GTCGCTCTAT GCCTCGGCGG CGGCGTTTTC GGGCTGAGCC TCGGCAAGCA CGTCACGCAG AGCGGCTTCT ACGACGACGG CAGCCAATCG GTGCAAGCAT CGGTGCTGGG CGACCAGGTC TACGGCCGAG ACCGAAGCGG TCACATCGTC GCGATCTTCC AAGCCCCAGC CGGCAAGACC GTTGACGACC CGGCCTGGTC AAAGAAGGTC GTCGACGAGC TCAACCGGTT CCAGCAGGAT CACCCCGACC AGGTCTTGGG ATGGGCCGGC TACCTGAGAG CGAGTCAGGC GACCGGCATG GCCACCGCCG ACAAGAAGTA CACCTTCGTT TCCATCCCGC TCAAGGGTGA TGACGACGAC ACCATCCTCA ACAACTACAA GGCCATCGCA CCCGACCTGC AGCGGCTCGA CGGAGGCACG GTGAAGCTCG CCGGGCTGCA ACCGGTGGCC GAGGCGTTGA CCGGCACCAT CGCCACCGAC CAACGGCGAA TGGAAGTGCT GGCGCTGCCG TTGGTGGCGG TGGTGTTGTT CTTCGTGTTC GGCGGCGTGA TCGCCGCCGG CCTACCGGTG ATGGTCGGAG GGCTGTGCAT CGCCGGCGCG CTGGGCATCA TGCGGTTCCT CGCGATCTTC GGTCCCGTGC ACTATTTCGC CCAGCCCGTG GTGTCGCTGA TCGGTCTGGG GATCGCCATC GACTACGGGT TGTTCATCGT GAGCCGGTTC CGCGAAGAGA TCGCCGAAGG CTACGACACC GAGACGGCAG TACGGCGCAC GGTGATCACC GCCGGACGCA CGGTGACGTT CTCGGCGGTG TTGATCGTCG CGTCGGCGAT CGGTCTGCTG CTCTTCCCGC AGGGTTTCCT GAAGTCGCTG ACCTACGCCA CGATCGCATC GGTGATGCTG TCGGCCATCC TGTCTATCAC CGTGTTGCCG GCCTGTCTGG GGATCCTGGG CAAACACGTC GACGCGCTCG GCGTGCGGAC CCTGTTCCGG GTGCCCTTCC TGGCGAACTG GAAGATTTCG GCCGCCTACC TGAACTGGCT CGCCGACCGC CTGCAGCGGA CCAAGACCCG CGAAGAGGTC GAAGCCGGCT TCTGGGGCAA GCTGGTTAAC CGGGTGATGA AGCGCCCAGT GCTGTTCGCC GCACCGATCG TCATCATCAT GATTTTGCTG ATTATCCCGG TGGGCAAGCT GTCATTGGGC GGGATCAGCG AGAAGTACTT GCCGCCGACC AATTCGGTGC GCCAGGCGCA GGAGGAGTTC GACAAACTCT TCCCCGGATA CCGCACCAAT CCGCTGACAC TGGTGATCCA GACCAGCAAC CATCAACCGG TCACCGACGC GCAGATCGCT GACATCCGCA GCAAGGCGAT GGCGATCGGC GGATTCATCG AGCCGGACAA CGATCCGGCG AATATGTGGC AAGAGCGTGC CTACGCGGTA GGCGCATCTA AAGATCCATC GGTGCGCGTC CTGCAGAACG GGTTGATCAA CCCGGCTGAC GCGTCGAAGA AGCTCACCGA GCTGCGCGCG ATCACCCCGC CCAAAGGAAT CACGGTCTTG GTCGGTGGAA CTCCCGCCCT GGAGCTGGAT TCAATCCACG GCCTGTTCGC GAAGATGCCG CTGATGGTGG TCATCCTGCT GACCACCACG ATCGTCTTGA TGTTCTTGGC GTTCGGCTCG GTGGTGCTGC CAATCAAGGC GACGCTGATG AGCGCTCTGA CGCTCGGGTC CACCATGGGC ATCCTGACGT GGATATTCGT CGACGGACAC TTTTCGAAGT GGCTGAATTT CACGCCGACC CCGCTGACAG CGCCGGTGAT CGGGCTGATC ATCGCGCTGG TCTTCGGCCT ATCCACCGAC TACGAGGTGT TCTTGGTGTC CCGGATGGTC GAGGCGCGAG AGCGCGGCAT GTCGACCCAG GAGGCGATCC GGATCGGCAC CGCAGCCACC GGACGCATCA TTACCGCCGC GGCGCTGATT GTTGCCGTCG TCGCGGGCGC GTTCGTGTTC TCCGACCTGG TGATGATGAA GTATCTGGCC TTTGGACTGA TGGCGGCGCT GCTGCTGGAC GCGACCGTGG TGCGGATGTT TTTAGTGCCA TCGGTGATGA AGCTGCTCGG CGATGACTGC TGGTGGGCAC CGCGCTGGGC CAGACGCCTG CAGACCCGCA TCGGGCTGGG CGAGATCCAC CTGCCCGACG AGCGCAAGCG GCCCGTCAGC AACGGGCGTC CCGCACGTCC TCCGGTCACA GCTGGGCTGG TTGCGGCGCG CGCCGCTGGG GACCCGCGCC CACCGCACGA TCCGACCCAT CCGCTGGCGG AGTCACCTCG ACCGGCCCGC TCGAGTCGAG CAAGCTCACC GGAGCTCACG CCTGCCCTGG AAGCAACTGC CGCGCCGGCG GCGCCGTCTG GGGCGAGCAC CACACGGATG CAGATCGGGT CGTCGACGGA GCCGCCGACA ACCCGCCTCG CGGCTGCCGG TCGGTCCGTG CAGTCGCCAG CATCCACGCC GCCACCAACC CCGACCCCGC CATCGGCCCT GTCTGCCGGT CAGACCCGGG CTATGCCGCT TGCGGCGAAC CGCTCCACAG ACGCAGCCGG TGACCCGGCC GAACCCACCG CGGCCCTGCC AATCATACGG TCGGACGGCG ACGACTCAGA GGCAGCCACT GAGCAGCTGA ATGCCCGCGG CACGAGCGAT AAGACGCGTC AGCGCCGCCG CGGCGGCGGC GCCCTGTCCG CCCAGGATCT GCTTCGCCGC GAAGGACGCC TTTAA
|
Protein sequence | MFAWWGRTVY RYRFIVIGVM VALCLGGGVF GLSLGKHVTQ SGFYDDGSQS VQASVLGDQV YGRDRSGHIV AIFQAPAGKT VDDPAWSKKV VDELNRFQQD HPDQVLGWAG YLRASQATGM ATADKKYTFV SIPLKGDDDD TILNNYKAIA PDLQRLDGGT VKLAGLQPVA EALTGTIATD QRRMEVLALP LVAVVLFFVF GGVIAAGLPV MVGGLCIAGA LGIMRFLAIF GPVHYFAQPV VSLIGLGIAI DYGLFIVSRF REEIAEGYDT ETAVRRTVIT AGRTVTFSAV LIVASAIGLL LFPQGFLKSL TYATIASVML SAILSITVLP ACLGILGKHV DALGVRTLFR VPFLANWKIS AAYLNWLADR LQRTKTREEV EAGFWGKLVN RVMKRPVLFA APIVIIMILL IIPVGKLSLG GISEKYLPPT NSVRQAQEEF DKLFPGYRTN PLTLVIQTSN HQPVTDAQIA DIRSKAMAIG GFIEPDNDPA NMWQERAYAV GASKDPSVRV LQNGLINPAD ASKKLTELRA ITPPKGITVL VGGTPALELD SIHGLFAKMP LMVVILLTTT IVLMFLAFGS VVLPIKATLM SALTLGSTMG ILTWIFVDGH FSKWLNFTPT PLTAPVIGLI IALVFGLSTD YEVFLVSRMV EARERGMSTQ EAIRIGTAAT GRIITAAALI VAVVAGAFVF SDLVMMKYLA FGLMAALLLD ATVVRMFLVP SVMKLLGDDC WWAPRWARRL QTRIGLGEIH LPDERKRPVS NGRPARPPVT AGLVAARAAG DPRPPHDPTH PLAESPRPAR SSRASSPELT PALEATAAPA APSGASTTRM QIGSSTEPPT TRLAAAGRSV QSPASTPPPT PTPPSALSAG QTRAMPLAAN RSTDAAGDPA EPTAALPIIR SDGDDSEAAT EQLNARGTSD KTRQRRRGGG ALSAQDLLRR EGRL
|
| |