| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2349 |
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| Symbol | |
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| ID | 5205118 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 2925461 |
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| End bp | 2926609 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640600612 |
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| Product | OmpW family protein |
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| Protein accession | YP_001281239 |
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| Protein GI | 148654146 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3047] Outer membrane protein W |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.306712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAC CCCTCTCTTT TGCCTGTGCA GTAGCTGCAC CTATACTATT TAGCCATTCA
GCTATGGCTC AATTTGATTA TTCAAAATAC ATAGAAACCG ATGGTAGCTT CAAGCGCTTC
TCAGTTTCAG CAGGTTGGTT GCATGCAAAT CCAACCGGTG ATGCTACGCC AGTTAAAAAT
ACCACTGCGA TATCAGATGG CACAAGCCAC AACAATGGTA GCGTGAGATC AGGTACCGTA
AAACGGGTGC TAGATCCAGA CCAAGGCCTA GACAGTGCTG CTGAAAACCA AGCAAGATTT
GATGAAATTA ATGGCGGCTT GAGCCTTCCG GGTGACGACA ATACTGACTT ATCCAATACC
GCTTTAGGTA ATTTGTCAGG TACAACTGTG ATTAACGGTC TACAAAAATT TGCGACACCT
GGCACAGGTC TTGAATCAGA TGATGTAGAC ACTTTGGGTA TGCTACTAAA CTATCATATA
GATGATAACT GGTCAGTAGA GGTGAAGGCT GGCTTTCCGC CTAAAGTCGA CATCTTAGGT
AAAGGTACTG TGGTTGCACC TTTTAGAGGT GTGGTAACCC CATCAGGTAT TGCCGAACAA
GCCATTGGTG ACTTTAATAT TAAAGATGAC ATTGTGATTA CCGATTTATC ACAAGGCAGC
AAAGCCTCTA CTGCACGTGC TTGGTTGCCG GCCACAGAGC TACATTATAA GTTTGGTAAA
TCAGGGGTTA ATAAATTCCG TCCTTATGTA GGCGCAGGTG TGATGTATGC CTATTTTAAC
GACTTAAAAC TAAATTCAGG TATTCGTCAA GATTTAGTGG ATGCTGGCCA TATGATTCAA
AACATCAAAG ATGGCAATGC CGGTACCTCT TTGCAATACG ATGGTCCTGA CGGTCGAACA
ACACCTTCTA GTAGTGGCAT GCACGTAAAA GTTAAGGCTG ATAGTGCTTG GGCACCTATT
GTCACTGTCG GTGCTACCTA TGACTTCGAT GACAGCTGGT TTGCCGTAGG ATCATTGTCT
TATGCTAAGT TGGATAGCGA CAGCACCATC ACCGTCTCTA ACGATAACGG CGAACAATTA
ATTAAAGCAG TTTCTAAGAT TGATATTGAT CCTTATATCA GCTACTTAGG GGTCGGTTAC
CGCTTCTAA
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| Protein sequence | MNKPLSFACA VAAPILFSHS AMAQFDYSKY IETDGSFKRF SVSAGWLHAN PTGDATPVKN
TTAISDGTSH NNGSVRSGTV KRVLDPDQGL DSAAENQARF DEINGGLSLP GDDNTDLSNT
ALGNLSGTTV INGLQKFATP GTGLESDDVD TLGMLLNYHI DDNWSVEVKA GFPPKVDILG
KGTVVAPFRG VVTPSGIAEQ AIGDFNIKDD IVITDLSQGS KASTARAWLP ATELHYKFGK
SGVNKFRPYV GAGVMYAYFN DLKLNSGIRQ DLVDAGHMIQ NIKDGNAGTS LQYDGPDGRT
TPSSSGMHVK VKADSAWAPI VTVGATYDFD DSWFAVGSLS YAKLDSDSTI TVSNDNGEQL
IKAVSKIDID PYISYLGVGY RF
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