| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_2155 |
|---|
| Symbol | |
|---|
| ID | 5206701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 2687514 |
|---|
| End bp | 2692343 |
|---|
| Gene Length | 4830 bp |
|---|
| Protein Length | 1609 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640600402 |
|---|
| Product | CheA signal transduction histidine kinase |
|---|
| Protein accession | YP_001281045 |
|---|
| Protein GI | 148653952 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATC AGCCAAATGC CTTATTCACC GCCCGCTGGA TGCTACCGCT ACTAAAACAG
CAGCTGCTTG AACTGCATAA TAAACAGCTT AAGCAGCCTG CCACCGCTGA CAACTTGGCG
CAGATTTGTC ACGGCTATCA GCAAGTTTTT GAAAAGCTGC ACAGTGCTGA TTTGGTTGAT
TTTGCGAATG TGGCACAGGC TATTTATAAC ACGACTTGTG CTGTAAGCTC CCAACAGCTT
AGCCCTCAAG TATTGCCTTC GGTGGTTACT GCCAGTAAGC AGCTGTTACA AGAGCTGAGC
TATTATGTAG AAATTGGTAC GTATCAGCCT GATATTTTGC ATCAATGTGA ACAGCATTTA
CAGCAGCTTA GTACAGGTGC TGTAAAAGGC CATCTGAAAA AAAATAGCAA ACACAAACCT
GAGCACGATA TTAAACCAAC TCAGGTTAAG CAAGAGGATA ACAGCACTGA GGACGACCGG
GTAGTTATTG CGCTACCTGC CCGCTATGAT ACTGAGCCGA GCTTAGATCA AACCCTAACG
AGCAGTCAGC CAAAACAGAT GGACTTTGCC ACTGACAGCG CGCTTTATGA TAAGCGCGGT
TACAAACGTC TGTCCCATTC TAAAACTTAC CCCACCAGGC CTGACTCAAG CACTCAGCAC
AGCCAATCTT TGGCATCTTT ACACAGCACT AAAGCCGCTG GTCTATCTGA GTTATTAAAA
AGCACCGTCG ATGAGGTGCA TTTGCCAAGC GATGACCCCG ACTGTGATGT TGAAATAAAG
CAAATCTTCG TTGAGGAAGC ACAAGAGGTG CTACAAGCGA TAACCGAAGC AATGGCTCAG
CTTACACCTC ACTTGCAGGA CAAAGTGCAG CTCGGTGAGG TGCGCCGCGG TTTTCATACG
CTAAAGGGGT CGGGGCGTAT GGCTGGAGCA CATACCATCG CTGAGCTGGC TTGGGCCATT
GAAAACATGC TTAATCGGCT CTTAGATGAC AGTATTGAGC CGACGACAGG TATCTGGCAG
TTACTCACAG AAGTGGTGGC ACAATACCCA GCGCTGGTGG CGATATTCGC TGAGCCTGCT
TCTGCAGACA AGCCCAAGCT GCCGCTTTAT CCCTCAAAGA TAGTAGATCA GATAGCCGCT
GCTAACTTAT ATGCCAACAA CAAACACACA GAGTCTGATG ATTGGCAGCT GCTTCAGCCA
CAGCTTTCTG AAGCTATCGA AACTATCGAA GCTATCGAAG CTATAAATGA CGACCAGGCT
CATCTGCCTC AGCGCCTACC GCTGTCTTTA GACGCCGCTG CACCGGCACA GAGTACTGCG
CTTAGAAACA GTGTAGATAA TGCCATTGAT GAGGCAGAGC TGGCGCAGGT GTTTATGGCA
GAGGCCACTG AACTGCTGCA AAGTATCGAC GCTATGCTGG CACAACACCA AGACTCATCA
AGCTTTGAGG TCGATGACAA GCTGCTGCGC GCCTTCCATA CCTTGCGAGG GGCAGCCAGT
AGCCAATCTT TAACCACCAT TAGCCAGTTA AGTGCCGCAG TAGAGCAAGA TCTAGAGCAG
CTGCAACAAA GCGATCAGCT GATCACTCCA AGCTATGCGG ACACCTTGAG GCAATCAATT
GGACTGATAA AAAGTCACTT ACAGCAGCAG TATCCGCATC TGTATTTAGA ACAGACACGC
GATAATGACA CCCAGCACCA TGTTGGCCTA AAAGATGCGC CGATAGATGC ACCAATAGAT
GAGCCAATAG CTGAGCATCA TGATGATGTC AAAGAGCTAG ATAGCGATAT TGGTAGTCAT
GTGGCTCTTA GTGTGGCTGA GCTGATTGAC GGCATCGATG ACCTATTAGA TGCAGAATGG
CGTCTGTTGC CGTTGGCACA TACAACAAAT GAGCCGATAG AGGATAATGA AGCTGAACAA
AGCAGTGAGC AGTCTTTATC GCAGCAAAGC CTTCAAGGTT ATGTGGACGA TATGCTTCAG
CAAATTAAGC AGCTGAGCTT ACGTGTGGGT CATTCTGCCA AATTTATCAG TGTCCTAAAT
TGTTTGCAGT TGGTATATCA AGCATTTAGT AATGACATTG AACTTGCTCA AAAATGGCTG
CACAACCGCC GAAGGCTTGC TCTTTTGATT GCCGTGCACG AGCAGTTGAC TGGCTTATTT
GACGCTTTGG CAGGTCGCAT GACGCTCAAA GTGAATGACA CATTATTGGC TCAGCTCGGT
GATGAGTTAA ATAAAGCTCA GGCCAGCCGA CCTTTGATAA ACCGATTCAG TGCTGAGCCT
AAAAGCAAAC AGGGTTTAAG CGATGATAAC GAACAACAAA ACACCGAGGC AGATGCTGAG
CTGCTTGCCA TCTTTATTGA AGAAGCACAG CAGCTTGATA CAGATAGCCA AGAGCAGTTG
CGTTTATGGC AACAAAACCC AGCGGATTTA GCACCAGTTA ACGTTTTGCT GCGTTATCTA
CACACCTTAA AAGGTGGGGC ACGCATGGCT GGTATAGATA GCTTAGCTGA GCTGACACAT
GAAGCGGAGA CGTTATACGA GTATTTGTTA GATCAGCAAA TTGTGCCTGA TGCTAATTGG
GTGGCACTGA TGCAGTCAGT ACAAGATACC TTGTCCGCTC AAGTAGACAG TTTGGTGCGG
CAAGGGCAGT CATTTTTTGT GCCTGAGCTG GTGGCCAAAC TGCAGACCAT AGTACGTAGC
AAGCGACTAC CGGAGTCTGA TACTAAGCCG ATTCAGCTTT ACACAGAGGG GGATACTGCG
GCTGACCATG ACAAAGTGTC TGTTAAAGCT ACTATAATGG CTGAAAATAA GGCGCCAAAG
GCTCAAAGTA CTGAAAACAT TGACCACAAA CAGAGTGCCC ATGATATCAG TCAGATGCCA
CCTAGCTTGC TAAGATCTCA GAGTGGTGCG ACGCAAGATA GCAGCAACGA GATGATTCGG
GTGCCTGCCA AGCTGATGGA GCAGATGATT GATTTATCGG CAGAGTCGGC TATTCATCGT
TCAGGTATTG AGCTCAATAT GAGCAGCGTG GCAGGTACGT TAAGTGAGAT GGAGTCTACC
GTACAGCGTC TGGCAGAGCA GTTGCGGCGT ATGGATATTG AGCTTGAGGC TCAGATACGC
TCTCAGATTG AGGACCACGT CTTACAAGCC GATCAAAGCT TTGATCCGCT TGAGATGGAT
CAGTACTCAG CGCTTAATCA GTTGTCCAAG TCTTTGTCCG AATCGGCGTC AGACTTATTG
GAGATTAGAA CCAGTTTGCG CAGCAAGACC CGTGAGACGG AGAGCTTATT GCTGCAGCTG
TCACAGACTC AGACCCAGAT GCAAGAGGGG CTGATGAGCT CAAGGATGGT GCCTTTTTCG
CGGCTACTGC CCAGATTGCA GCGTACGCTT CGACAGACCG CAAATGAGGT GGGTAAAGAG
GCCAAGCTTG AGCTCATCAC CGATATAGAT GAGATAGATA GAACCGTGCT TGAGCGCCTC
ACTGCACCAC TTGAGCATAT GGTTCGCAAC GCCATCGATC ATGGCTTAGA GACGCCAGAT
CAGCGCGAAG CGTTAGGCAA ACCGCGCACA GGTCATATCA TCATGGAGAT GGGCCGAAAA
GGCAGCGAAA TTGTCATTCG TGTTAAAGAT GACGGTCAAG GTATTGATGT CAATTCTGTG
CGTAAAAAAG CAATCGCTTG CAGGCTTATG GATGCCCAAG ACAATACCTT AAGTGATCTG
GAAGTGATGC AATATATCTT CCATGCAGGG CTGTCGACTG CCAGTAGCCT CACTCAGATA
TCAGGGCGCG GTGTGGGCAT GGATGTGGTG CTCAATGAAG TACGCCAGCT GGGGGGTAAT
GTCACCGTGC ACTCCAGTGC TAATCAAGGG ACAGAGTTCA CCCTCACATT ACCACTGACC
CTTGCGGTGA TTGAGGCTCT GGTGGTTCGG GCAGGGGATC AAACTTATGC CGTGCCTTTA
TTACAAATTG AACGGATTGA GCGAATAGCG GCACAACGTT TGCGCAGTTT GTATGATTCT
AAGCGTAATC GCAATCAAAA TGGATCGCCA AAGACCGTGG GCGGTCATGA GTCGGCACAG
CTTAATGTGG GGGGTAAACC GTATCGAGTG CGCTATCTGA CCCAGCTGCT ATCCGGTGAG
ACGGTGGATG TTAAAGTATT CGATACGCAA GACAGCTTAC CGGTGCTGTT AATTAAACAT
CACGCTGGAC AAAGCTTTGC GCTACATGTC GATGAGATTA TAGGCTCACG CTCTGAGGTG
GTGGTTAAGC CATTAGGCCG TCCGCTATCA AGCATCGCTG GCTTATCGGC TGCCACCATT
ACGGCTGAAG GCTCGGTCAT GCTTATTTTA GATGTGCAGG CCTTGATACG TAAAGCATCG
CTCCCTGTAA GTGCTCAGAG TCGATTAAGT GGCGGTACAC AACCTGAACG GGTCATTCAA
AATCCAGCGC CTGCTACCAA ATCCCTTAAA CCACAAATCT TGATTGTTGA TGACTCGGTA
ACGGTGCGCA AGGTAACCGC ACGCATGCTA CAGCGACAGG GTTATCAAGC TCATGTTGCT
CGTGACGGGG TAGAGGCAGT CGAGATGCTA CAAACCTTGC GCCCTGATTT AATGCTACTT
GATATTGAGA TGCCACGTAT GGATGGCTTT GAGGTGGCTA CCCATGTGCG TCACAATCAG
GCTATCAGTC ATCTGCCAAT CATTATGATT ACTTCGCGTA GCGGTGATAA GCACCGTCAG
CGGGCGCTAA AAATAGGGGT TAATGCCTAC CTGGGCAAGC CATTCCAAGA AGCGAAACTG
GTGGCGCTTA TTCAAAATCT CATCAGCTAA
|
|---|
| Protein sequence | MSDQPNALFT ARWMLPLLKQ QLLELHNKQL KQPATADNLA QICHGYQQVF EKLHSADLVD
FANVAQAIYN TTCAVSSQQL SPQVLPSVVT ASKQLLQELS YYVEIGTYQP DILHQCEQHL
QQLSTGAVKG HLKKNSKHKP EHDIKPTQVK QEDNSTEDDR VVIALPARYD TEPSLDQTLT
SSQPKQMDFA TDSALYDKRG YKRLSHSKTY PTRPDSSTQH SQSLASLHST KAAGLSELLK
STVDEVHLPS DDPDCDVEIK QIFVEEAQEV LQAITEAMAQ LTPHLQDKVQ LGEVRRGFHT
LKGSGRMAGA HTIAELAWAI ENMLNRLLDD SIEPTTGIWQ LLTEVVAQYP ALVAIFAEPA
SADKPKLPLY PSKIVDQIAA ANLYANNKHT ESDDWQLLQP QLSEAIETIE AIEAINDDQA
HLPQRLPLSL DAAAPAQSTA LRNSVDNAID EAELAQVFMA EATELLQSID AMLAQHQDSS
SFEVDDKLLR AFHTLRGAAS SQSLTTISQL SAAVEQDLEQ LQQSDQLITP SYADTLRQSI
GLIKSHLQQQ YPHLYLEQTR DNDTQHHVGL KDAPIDAPID EPIAEHHDDV KELDSDIGSH
VALSVAELID GIDDLLDAEW RLLPLAHTTN EPIEDNEAEQ SSEQSLSQQS LQGYVDDMLQ
QIKQLSLRVG HSAKFISVLN CLQLVYQAFS NDIELAQKWL HNRRRLALLI AVHEQLTGLF
DALAGRMTLK VNDTLLAQLG DELNKAQASR PLINRFSAEP KSKQGLSDDN EQQNTEADAE
LLAIFIEEAQ QLDTDSQEQL RLWQQNPADL APVNVLLRYL HTLKGGARMA GIDSLAELTH
EAETLYEYLL DQQIVPDANW VALMQSVQDT LSAQVDSLVR QGQSFFVPEL VAKLQTIVRS
KRLPESDTKP IQLYTEGDTA ADHDKVSVKA TIMAENKAPK AQSTENIDHK QSAHDISQMP
PSLLRSQSGA TQDSSNEMIR VPAKLMEQMI DLSAESAIHR SGIELNMSSV AGTLSEMEST
VQRLAEQLRR MDIELEAQIR SQIEDHVLQA DQSFDPLEMD QYSALNQLSK SLSESASDLL
EIRTSLRSKT RETESLLLQL SQTQTQMQEG LMSSRMVPFS RLLPRLQRTL RQTANEVGKE
AKLELITDID EIDRTVLERL TAPLEHMVRN AIDHGLETPD QREALGKPRT GHIIMEMGRK
GSEIVIRVKD DGQGIDVNSV RKKAIACRLM DAQDNTLSDL EVMQYIFHAG LSTASSLTQI
SGRGVGMDVV LNEVRQLGGN VTVHSSANQG TEFTLTLPLT LAVIEALVVR AGDQTYAVPL
LQIERIERIA AQRLRSLYDS KRNRNQNGSP KTVGGHESAQ LNVGGKPYRV RYLTQLLSGE
TVDVKVFDTQ DSLPVLLIKH HAGQSFALHV DEIIGSRSEV VVKPLGRPLS SIAGLSAATI
TAEGSVMLIL DVQALIRKAS LPVSAQSRLS GGTQPERVIQ NPAPATKSLK PQILIVDDSV
TVRKVTARML QRQGYQAHVA RDGVEAVEML QTLRPDLMLL DIEMPRMDGF EVATHVRHNQ
AISHLPIIMI TSRSGDKHRQ RALKIGVNAY LGKPFQEAKL VALIQNLIS
|
|---|
| |