Gene PsycPRwf_0826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0826 
Symbol 
ID5206587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp979900 
End bp980715 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content51% 
IMG OID640599047 
ProductABC transporter related 
Protein accessionYP_001279728 
Protein GI148652635 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACT CTGCATCGAA TGCCCCAAAG CCTGAAGTGA TAAGCCCTTT AGAGAAAACC 
CCCGTGTCGA TAGCGCAGCC GGTTAGCTCG GATACTGCGT TGACCATGCT TAATCTGGCC
AAGCGCTACG GTAAGCGCTG GGTGGTAAAA GATGTGTCAT TTAGCGTGGA GCCAGGTCAG
GTTGTGGGTT TGTTAGGCCC GAACGGCGCT GGCAAGACCA CCAGCTTTTA TATGGTGGTG
GGGCTGGTGA ATATGGATAA AGGCATGGTA AAGCTTGGCA ATCAAGACCT GTCTAAATAC
GCCATGCATG AGCGCGCGCG CGCCGGTATT GGTTATCTAC CCCAAGAGGC TTCTATTTTT
CGTAAGCTGA CTGTACGAGA GAACATTCTT GCGATTTTAC AAACCCGAAA AGACTTAGAT
AAAGCGGCGC AGGAGCAAGA GCTTAACAAA CTCATCGCTG ATTTTAGCTT AGAGCATGTG
TGCCATTCGC TCGGTATGAG TGTGTCAGGG GGTGAGCGTC GGCGCTGTGA GATTGCACGT
GCACTGGCGG CCAATCCGAA GTTTATTTTA TTGGATGAGC CTTTTGCTGG TGTTGATCCT
ATCTCAGTCA GTGACATCAA AGAGGTGATT GTGGCGCTAA AACGCCGCGG TATTGGGGTG
CTGATTACCG ACCATAACGT GCGTGAGACG CTGGCGATTT GTGAGCATGC GTATATCGTC
AGTGAGGGCG CTATTATTGC CCATGGTACC TCAGAGGAGG TGTTAAATAA CGAGCTGGTG
CAAGAGGTGT ATTTAGGCCG CGACTTCCAG GCTTAG
 
Protein sequence
MSNSASNAPK PEVISPLEKT PVSIAQPVSS DTALTMLNLA KRYGKRWVVK DVSFSVEPGQ 
VVGLLGPNGA GKTTSFYMVV GLVNMDKGMV KLGNQDLSKY AMHERARAGI GYLPQEASIF
RKLTVRENIL AILQTRKDLD KAAQEQELNK LIADFSLEHV CHSLGMSVSG GERRRCEIAR
ALAANPKFIL LDEPFAGVDP ISVSDIKEVI VALKRRGIGV LITDHNVRET LAICEHAYIV
SEGAIIAHGT SEEVLNNELV QEVYLGRDFQ A