Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0826 |
Symbol | |
ID | 5206587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 979900 |
End bp | 980715 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640599047 |
Product | ABC transporter related |
Protein accession | YP_001279728 |
Protein GI | 148652635 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTAACT CTGCATCGAA TGCCCCAAAG CCTGAAGTGA TAAGCCCTTT AGAGAAAACC CCCGTGTCGA TAGCGCAGCC GGTTAGCTCG GATACTGCGT TGACCATGCT TAATCTGGCC AAGCGCTACG GTAAGCGCTG GGTGGTAAAA GATGTGTCAT TTAGCGTGGA GCCAGGTCAG GTTGTGGGTT TGTTAGGCCC GAACGGCGCT GGCAAGACCA CCAGCTTTTA TATGGTGGTG GGGCTGGTGA ATATGGATAA AGGCATGGTA AAGCTTGGCA ATCAAGACCT GTCTAAATAC GCCATGCATG AGCGCGCGCG CGCCGGTATT GGTTATCTAC CCCAAGAGGC TTCTATTTTT CGTAAGCTGA CTGTACGAGA GAACATTCTT GCGATTTTAC AAACCCGAAA AGACTTAGAT AAAGCGGCGC AGGAGCAAGA GCTTAACAAA CTCATCGCTG ATTTTAGCTT AGAGCATGTG TGCCATTCGC TCGGTATGAG TGTGTCAGGG GGTGAGCGTC GGCGCTGTGA GATTGCACGT GCACTGGCGG CCAATCCGAA GTTTATTTTA TTGGATGAGC CTTTTGCTGG TGTTGATCCT ATCTCAGTCA GTGACATCAA AGAGGTGATT GTGGCGCTAA AACGCCGCGG TATTGGGGTG CTGATTACCG ACCATAACGT GCGTGAGACG CTGGCGATTT GTGAGCATGC GTATATCGTC AGTGAGGGCG CTATTATTGC CCATGGTACC TCAGAGGAGG TGTTAAATAA CGAGCTGGTG CAAGAGGTGT ATTTAGGCCG CGACTTCCAG GCTTAG
|
Protein sequence | MSNSASNAPK PEVISPLEKT PVSIAQPVSS DTALTMLNLA KRYGKRWVVK DVSFSVEPGQ VVGLLGPNGA GKTTSFYMVV GLVNMDKGMV KLGNQDLSKY AMHERARAGI GYLPQEASIF RKLTVRENIL AILQTRKDLD KAAQEQELNK LIADFSLEHV CHSLGMSVSG GERRRCEIAR ALAANPKFIL LDEPFAGVDP ISVSDIKEVI VALKRRGIGV LITDHNVRET LAICEHAYIV SEGAIIAHGT SEEVLNNELV QEVYLGRDFQ A
|
| |