Gene PsycPRwf_0780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0780 
Symbol 
ID5204932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp929253 
End bp930083 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content47% 
IMG OID640599001 
Productalpha/beta hydrolase fold 
Protein accessionYP_001279682 
Protein GI148652589 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0600224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTACA TTACCCTTAA CAACGCCCAT ATCTATTACG AAGACAGTGC CCCCAATGAA 
AGCCGCTTTG AGCCGCAGTA TCGCAAGCCG GTGATGCTTT TTGCTCATGG TCTGCTGTGG
GGCACACCGT TATTTGATAA ACAAGTGGCT TATTTTCAAT CAAAGTACCG CTGCATTGCT
TTTGATTTTC GAGGTCAAGG TCAATCAGAG GTAACCAAAG ATGGCTATGA TATGGATAGC
CTAGCGGATG ATGCCATTGC TTTGCTAGAG GCATTAGACA TTGATAAGTG CCATTTTATT
GGGCTATCAA TGGGCGGCTT CGTTGGCCAG AGGGTGGCAA TCAGACGCCC AGATTTACTC
AAATCTTTGA TATTACTTGA GACCTCAGCT GATGCTGAAG ACCCCAAAAA GGCGGTCAGC
TACAATAAGC TAATGCGCGC CATCTCTTGG CTTGGTATCA GACGAGTCAG CAAAAAGGTT
ATGCCCATCA TGTTTGGTAA AACTTTTTTG TCAGATCGCA CGCGCCGCGA AGAGTATCAG
TTGTGGCTAA GTCACCTAAA TAGCAACAGC AAAAAAGGGG CGATACACGC CACACGCGGG
GTGATACAGC GTGAGGAGGT ATTGTCAAAG CTTGGTGATA TAACAACGCC CACGCTGATA
TTGGTTGGTG ATGAAGATGT CGCCACCCCT TATGATAAGG CGCAGCGCAT CCACTTTGCT
ATTCAAGGCT CAAAACTTGC CGTCATTCAA CGAGCAGGGC ATACCTCAAC GGTAGAAGAG
CCTGAGCAGG TCAACCACAA TATTGAGTGG TTTTTAAGCC TGCTGGATTA A
 
Protein sequence
MPYITLNNAH IYYEDSAPNE SRFEPQYRKP VMLFAHGLLW GTPLFDKQVA YFQSKYRCIA 
FDFRGQGQSE VTKDGYDMDS LADDAIALLE ALDIDKCHFI GLSMGGFVGQ RVAIRRPDLL
KSLILLETSA DAEDPKKAVS YNKLMRAISW LGIRRVSKKV MPIMFGKTFL SDRTRREEYQ
LWLSHLNSNS KKGAIHATRG VIQREEVLSK LGDITTPTLI LVGDEDVATP YDKAQRIHFA
IQGSKLAVIQ RAGHTSTVEE PEQVNHNIEW FLSLLD