Gene PsycPRwf_0580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0580 
Symbol 
ID5204515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp697117 
End bp699078 
Gene Length1962 bp 
Protein Length653 aa 
Translation table11 
GC content45% 
IMG OID640598795 
Productheat shock protein 90 
Protein accessionYP_001279485 
Protein GI148652392 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0326] Molecular chaperone, HSP90 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.219902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.360532 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAA ATAAACACAT GAGCGAAAAT CAAAACGCCA CTCAGCACGT TTTCGAAGCA 
GAAGTAGCAC AGTTGCTGCA TTTAGTGACT CACTCACTGT ACTCAAACTC TGATATTTTT
GTGCGTGAGT TGGTATCAAA CGCATCCGAT GCTTGTGACA AATTACGCTT TGAAGCCACC
AGCGATGACA GTCTTTATGA AGATGATGGT GAGCTAAAAG TTCGCATCGA TATTGATACC
GAGGCTAAGA CCATTACCTT TATCGACAAT GGTATTGGTA TGAATGAAGC GGACACAATT
GAGAACTTGG GTACCATTGC CAAATCTGGT ACCAAAGCAT TCTTAGAGCA ATTATCTGAA
TCACAAAAGC AAGATGGTCA ATTAATTGGT CAATTTGGGG TTGGTTTTTA CTCAGGCTTT
ATCGTTGCAG ACACGATTAC TGTTGAATCA CGTAAAGCGG GTGAGCCTGC AGATCAAGGC
GTACGCTGGG TATCTGACGG TACTGGTAAA TTTACCACTG AGAGCATCAC CAAAGACAGC
CGCGGCACCT CTATCACGCT ACATCTAAAA GATGAGTTCA GTGAAGGCGA AGACAACTAT
CTAGACCGCA ACAAGCTAAA AGCTTTGGTC AATAAATACT CTGACCATAT CAGCCTGCCA
ATTCAGATGC GTAAAGAGGT GTGGCAAGAG GAAGTCGCTG AGGAAGGTGA GGATGGCGAT
ACACCCACTG GCGGCGAAAT GGTAGTGACC GACGAGTGGG AGACTATTAA CAAGGCCAGC
GCACTTTGGA CCCGCTCAAG CTCTGAGATT GAAGACGAAG AGTATAACGA GTTTTATAAA
AACATCAGCT ATGACTTTGA AGATCCCTTA GCTTGGACTC ACAACCGAGT TGAAGGCCGC
GTGCAATACA CACAGCTGCT GTATATTCCC AAAAAAGCCC CATTTGATTT ATATGCCCGT
GAGCAGCAGC ATGGTCTAAA GCTATATGTA AAACGCGTAT TTATTATGGA TGACGCAGAG
CAGCTGCTAC CTATGTATCT GCGCTTCGTG AAAGGGGTAA TTGACTCTCA AGACCTACCA
CTGAACGTTA GCCGTGAGAT TTTGCAAGAG TCTCGTGATG TTAAGTCTAT TCGAGATGGT
AACGCGCGCC GTGTGTTGAC ACTATTAGCA AGCCTTGCAA ACAGTGAAGA TAGCGATAAG
CAACAGAAGT TCAAACAGTT CTACAGCGAG TTTGGCGATG TGATCAAAGA AGGTCTTGGT
GAAGATATGA GTAACCAAGA GCGTATTGCT AAGCTGCTGC GTTATGCCAC AACCACCACA
GACGGTTTAG AGACTGGCTT TGAAGACTAC AAAGCCCGCA TGAAAGAGGG CCAAAAAGCC
ATCTATTATC TAACCGCTGA GAATTTAGCT GCGGCCAAAA ACAGCCCACA ATTAGAGCTG
TTTAAGAAAA AAGGTATCGA AGTTATCTTG ATGACCAGCC GCGTTGATGA ATGGGCAATG
AACTTCTTAA CTCAGTTTGA TGGCACGCCA CTACAAAACA TTGCCAAAGG CGCTGTGGAC
TTAGGTGACT TGCAAGATGA GGCAGAAAAA GAAGAAGTCA AAAAAGCCGA AGAGAGCTTA
AAGCCTGTGG TAGATAAGCT AAAAACTGCG CTGGGCTCAC GTGCCAAAGA TGTGCGTGTG
TCAAATCGCT TGGTCGATAG TCCAGCGATT TTAGTCACCC CAGAGGGAGA GCTGTCACCA
CAAATGATTC AGATGCTCAA GCAAATGGGC CAAGAAGTGC CAGAGACTCA GCCTATCTTG
GAGGTCAACC CCACCCATCC GCTGATTCAA AAGCTTGAAT CAAGTGAGCA GTTTGATGAC
TTAGCGCAGG TTATCTTCGA TCAGGCACTA TTGGCGGAAG GGGGGCAGTT AGAGGACCCA
TCGGCCTATC TAAAACGCAT TAACGAGCTA CTGCTTAAAT AG
 
Protein sequence
MSENKHMSEN QNATQHVFEA EVAQLLHLVT HSLYSNSDIF VRELVSNASD ACDKLRFEAT 
SDDSLYEDDG ELKVRIDIDT EAKTITFIDN GIGMNEADTI ENLGTIAKSG TKAFLEQLSE
SQKQDGQLIG QFGVGFYSGF IVADTITVES RKAGEPADQG VRWVSDGTGK FTTESITKDS
RGTSITLHLK DEFSEGEDNY LDRNKLKALV NKYSDHISLP IQMRKEVWQE EVAEEGEDGD
TPTGGEMVVT DEWETINKAS ALWTRSSSEI EDEEYNEFYK NISYDFEDPL AWTHNRVEGR
VQYTQLLYIP KKAPFDLYAR EQQHGLKLYV KRVFIMDDAE QLLPMYLRFV KGVIDSQDLP
LNVSREILQE SRDVKSIRDG NARRVLTLLA SLANSEDSDK QQKFKQFYSE FGDVIKEGLG
EDMSNQERIA KLLRYATTTT DGLETGFEDY KARMKEGQKA IYYLTAENLA AAKNSPQLEL
FKKKGIEVIL MTSRVDEWAM NFLTQFDGTP LQNIAKGAVD LGDLQDEAEK EEVKKAEESL
KPVVDKLKTA LGSRAKDVRV SNRLVDSPAI LVTPEGELSP QMIQMLKQMG QEVPETQPIL
EVNPTHPLIQ KLESSEQFDD LAQVIFDQAL LAEGGQLEDP SAYLKRINEL LLK