Gene PsycPRwf_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0539 
Symbol 
ID5206861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp642873 
End bp643562 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content49% 
IMG OID640598754 
Producthypothetical protein 
Protein accessionYP_001279444 
Protein GI148652351 
COG category[S] Function unknown 
COG ID[COG3753] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00154515 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000103423 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGTCTAC TCGGCAATCT AATCACTCAG GTGGCACGCC AAGCATTGGA TCCTAATGAA 
GCCAAGCGCA ATCCGGTTAA TCAGCGTATC GAGCCACGTG CTACGGGCGG CTTAGGGGAT
ATTTTAGGGA GTGTTTTAGG CGGCAACAAT CAAGCGCATC AAAGCCAAGC ACAGGACAAT
GGCTTTGGTT TAGATGACCT ATTAGGCGGC GTTCTGGGCG GTAGTATGGG CGGCAATCGC
AATACGGGTG GCTTAGGCAG TATCTTAGGT AGCGTCTTAG GTGGCGGTAG CATGGGCGGC
GCTCGCGCAG GTGGTGGTAA AGCCATGTTA GTAGCGGCGC TGATGCCTAT TGCACTTAAT
TGGATTCAGC GCAATGGCGG CTTGTCTGGT GCTTTATCTA AGATCCAAGA CTTAGGCTTT
GGCCATCAGG CGCAATCTTG GCTGAGCAAT GAGCAACAAA ACCAAAACCT TGACCCCAAT
CAAATCAATA AACTATTTGA TGAGCAAGAG CTTGAGCAAG TTCGTAGCCA GACAGGCGCA
GATGATACAG AAGTACGCCA AGGTTTAGCC GAGCTATTGC CTGAGATTGT TAACCAATTG
ACCCCAAACG GCGGCTTAGA TAAAGAGCAA GAAGCCAACC AAGAGATTGA AGATATCTTA
CGTCAAATCT CAGGCAGCTT GCCAAAATAA
 
Protein sequence
MSLLGNLITQ VARQALDPNE AKRNPVNQRI EPRATGGLGD ILGSVLGGNN QAHQSQAQDN 
GFGLDDLLGG VLGGSMGGNR NTGGLGSILG SVLGGGSMGG ARAGGGKAML VAALMPIALN
WIQRNGGLSG ALSKIQDLGF GHQAQSWLSN EQQNQNLDPN QINKLFDEQE LEQVRSQTGA
DDTEVRQGLA ELLPEIVNQL TPNGGLDKEQ EANQEIEDIL RQISGSLPK