Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0539 |
Symbol | |
ID | 5206861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 642873 |
End bp | 643562 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640598754 |
Product | hypothetical protein |
Protein accession | YP_001279444 |
Protein GI | 148652351 |
COG category | [S] Function unknown |
COG ID | [COG3753] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00154515 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000103423 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAGTCTAC TCGGCAATCT AATCACTCAG GTGGCACGCC AAGCATTGGA TCCTAATGAA GCCAAGCGCA ATCCGGTTAA TCAGCGTATC GAGCCACGTG CTACGGGCGG CTTAGGGGAT ATTTTAGGGA GTGTTTTAGG CGGCAACAAT CAAGCGCATC AAAGCCAAGC ACAGGACAAT GGCTTTGGTT TAGATGACCT ATTAGGCGGC GTTCTGGGCG GTAGTATGGG CGGCAATCGC AATACGGGTG GCTTAGGCAG TATCTTAGGT AGCGTCTTAG GTGGCGGTAG CATGGGCGGC GCTCGCGCAG GTGGTGGTAA AGCCATGTTA GTAGCGGCGC TGATGCCTAT TGCACTTAAT TGGATTCAGC GCAATGGCGG CTTGTCTGGT GCTTTATCTA AGATCCAAGA CTTAGGCTTT GGCCATCAGG CGCAATCTTG GCTGAGCAAT GAGCAACAAA ACCAAAACCT TGACCCCAAT CAAATCAATA AACTATTTGA TGAGCAAGAG CTTGAGCAAG TTCGTAGCCA GACAGGCGCA GATGATACAG AAGTACGCCA AGGTTTAGCC GAGCTATTGC CTGAGATTGT TAACCAATTG ACCCCAAACG GCGGCTTAGA TAAAGAGCAA GAAGCCAACC AAGAGATTGA AGATATCTTA CGTCAAATCT CAGGCAGCTT GCCAAAATAA
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Protein sequence | MSLLGNLITQ VARQALDPNE AKRNPVNQRI EPRATGGLGD ILGSVLGGNN QAHQSQAQDN GFGLDDLLGG VLGGSMGGNR NTGGLGSILG SVLGGGSMGG ARAGGGKAML VAALMPIALN WIQRNGGLSG ALSKIQDLGF GHQAQSWLSN EQQNQNLDPN QINKLFDEQE LEQVRSQTGA DDTEVRQGLA ELLPEIVNQL TPNGGLDKEQ EANQEIEDIL RQISGSLPK
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