Gene PsycPRwf_0277 details

Gene Information

• Locus tag: PsycPRwf_0277
• ID: 5205667
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Psychrobacter sp. PRwf-1
• Kingdom: Bacteria
• Replicon accession: NC_009524
• Strand: +
• Start bp: 330054
• End bp: 330434
• Gene Length: 381 bp
• Protein Length: 126 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 640598487
• Product: helix-hairpin-helix repeat-containing competence protein ComEA
• Protein accession: YP_001279182
• Protein GI: 148652089
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1555] DNA uptake protein and related DNA-binding proteins
• TIGRFAM ID: [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region; [TIGR01259] comEA protein

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0216595
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 32
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGCTATG GGAGCTGGCC AAACAGCATG AATAGGCGTA CTAGCGCTTT AATTTTGGGG 
ATGCTGTGCA TGATGCAGGC GGTGTTAATG CCCGGTGCTT GGGCGCAGCA ATGCTTTGCC 
GATGCCCATC AAGCCTATGC ACATCTAATA AATGAGCAGC AAAATCAGCA ATTAGCAGAG 
CAAAGCGTGA CGGTTCATTT AAATAGCGCG ACCGAAGGTG AACTGACTCA GCTCACCGGT 
ATTGGCAGCA ATAAAGCGCA GCAAATTATC TTGTATCGAG ACGCCTTTGG GCCATTTGGC 
TCGGTGGATG ATTTGGCAAA GGTAAAAGGC ATCGGGGATA AAACCGTTGC CAAAAACCGT 
GCCCGAATGA GTATAGAGTA G 

 

Protein sequence

MRYGSWPNSM NRRTSALILG MLCMMQAVLM PGAWAQQCFA DAHQAYAHLI NEQQNQQLAE 
QSVTVHLNSA TEGELTQLTG IGSNKAQQII LYRDAFGPFG SVDDLAKVKG IGDKTVAKNR 
ARMSIE