| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0254 |
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| Symbol | |
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| ID | 5204968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 296953 |
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| End bp | 299181 |
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| Gene Length | 2229 bp |
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| Protein Length | 742 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640598464 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_001279159 |
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| Protein GI | 148652066 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.016007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00234339 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACCGACT CTTTATTTTC GACCCGCCAC TATAGCTACC CTACGCTTGA TGACACCATT
CGTCAAAAAA TGGCGCATTT ACAGCAGTCT ATCGCCAAGC TGGAGTCGAA TTTAATCGCA
CCAGAGTCCA TGGATAAACG TTTATCAAAC ACAGTATATG ATGATAAAGT AGCTGATCAG
AAAATAGCTG ATAAGCACTC AGCACCGCAC AACAGTGTAT TGTCATCAAG CGAGGTTGAT
TATGCTGGCG AGCTAAACCC AAGCCAGCTA CTGGCCGCCA CCACCACCGA AGGTAAGGTA
TTGGTCATTG CTGGCGCCGG ATCTGGTAAG ACCAAAACCC TCACCTACCG CACCAGTTAT
TTGATTGAAA GCGGTGCGTC TCCAAGCAGT ATTCTGCTGC TGACCTTTAC TCGAAAAGCA
GCCAACGAAA TCAAGGGCCG TGTCAAAAGC CTGTTGGCCG AAAGCTTGGC CGATAATCGC
GCGTTAAGCG GCCTGGATCT GAATGCCATT ACCAGCGGCA CCTTTCACTC TTTTTGTAAT
ATGCTACTGC GCCGCTATTC AGGCTTACTG GGCATCAACC CTAAGTTTAC GATTTTGGAC
ACCGGTGATA GCGAAGATGC GCTGGATATG ATTTGCAAAG AGCAAGGCAT TGTGCGCAAA
AACATGAAGC AGGCTTTTCC GCGCAAAAAG ACCCTCCAAA ATCTAATCTC CACCTCTCGC
AACCGTCATA TTTTACTGCG CGATTTGATT GAAAATGACT ATCCTGATAT CGCCATTCAT
ATTCCGCTGA TTGAAGATCT GGCGATGGCG TATCACAAGT ATAAGCGTGC CAATCATTTA
TATGATTTTG ACGATATTAT CAGCCAAGTG GTTTATCATC TAAAAAATAA CCTGCAATTT
CGCAAACTGA TTCAAGACAC CTACCGTCAT GTCATGGTAG ATGAGTATCA AGATACCAAC
ATTCCCCAAA AGCAGTTAAT CGACTATCTC TGTGAGCCTG ATAACGTGTC GCTGATGGTG
GTCGGTGATG ACAACCAAAG TATTTATGCG TTTCGCGGTG CCAATTACGA AAATATTCTC
CTGTTTGCCG ATGGTTATCC CGACGCCAAG CTGATTAAAC TTGAGCAAAA CTACCGCAGC
ACACCTGCCA TTTTAGACTA CGTCAATGCG CTGTCTGAAC ACATCACTTT GGGCTATCAA
AAAAAGCTGT TTTCTAACCT AGCGATTGAA GGTGAAAAGC CAACACTGTG CCGGCGCAGT
AATGACAAGC AAGAGGCGGT TTATATTGCC GATAAAATTA TCGAGCTTAA GCCAGAGTAT
GACTTTAATG ACTTTGCAGT ACTGAGCCGC ACCTCGTTTC AGTCCAACGA GATTCAACTG
CAGTTTATGC AGCGCAATAT TCCTTTTATC GTGGTAGGCG GTATTAAATT TATTGAAAAG
CGCCATATCA AAGACATCTT GGCGCTGGTG AAAATCTTAT ATAACCCCAA TGACACCATT
GCTTGGCACC GTATTTTAAC CTTGTTCAGT GGCGTTGGTG ATGTGACCGC TTCTAAGATT
ACCCAAGCCA TTACCAGCAG TAATGACTCG TTACAGCCGC TACTCGATCC CAAGCTGACC
AAAAACAAAG CGCCCATTAA CGAGCTGTAT CATGTGCTCA TTAAAGCGCA GCAGCAAGCC
ACTGTCGCCG ATATCTTGCA AACTCTGATC GACTTTTATG CGCCTATCTT AAAAACCTTG
GAAGACAATT GGCGGGAACG CTCTGAGGAT TTTCGAGTGC TTATCAATTT AGCGCAAGAG
CACAGCAGCT TAGATAACTT CTTGGAGAAT TTAGCACTTG ATCCGCCCAA TGACTCGGTC
GCTGTGATGA CTAATCCTGA GGACAAACAG ACCGATGCGG TGACCATTTC TACCATTCAT
AGCGCCAAAG GTCTTGAATG GCCGGTGGTC TTTGTTAATG CTTTAGTCGA TGGCCTAATG
CCGCATCACC GCTCTTTGCA TGAATTTGAG GCGTTAGAAG AAGAGCGTAA GCTGTTTTAT
GTGGCCTGTA GTCGCGCCAA AACCCATCTA TATTTAACCG CCCCTGATTA TTTCTCAAGC
TTCGCCGGTT ACTTCGATAA GATATCCCGC TTTATCAGTG AAGTGGCCAC AGATACCCTA
CAAGTTGATG CTGCAGAATC TATAAGAAAA TCTGATGACT CTCAATCAAA TGACCCCGAA
TGGTGGTAG
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| Protein sequence | MTDSLFSTRH YSYPTLDDTI RQKMAHLQQS IAKLESNLIA PESMDKRLSN TVYDDKVADQ
KIADKHSAPH NSVLSSSEVD YAGELNPSQL LAATTTEGKV LVIAGAGSGK TKTLTYRTSY
LIESGASPSS ILLLTFTRKA ANEIKGRVKS LLAESLADNR ALSGLDLNAI TSGTFHSFCN
MLLRRYSGLL GINPKFTILD TGDSEDALDM ICKEQGIVRK NMKQAFPRKK TLQNLISTSR
NRHILLRDLI ENDYPDIAIH IPLIEDLAMA YHKYKRANHL YDFDDIISQV VYHLKNNLQF
RKLIQDTYRH VMVDEYQDTN IPQKQLIDYL CEPDNVSLMV VGDDNQSIYA FRGANYENIL
LFADGYPDAK LIKLEQNYRS TPAILDYVNA LSEHITLGYQ KKLFSNLAIE GEKPTLCRRS
NDKQEAVYIA DKIIELKPEY DFNDFAVLSR TSFQSNEIQL QFMQRNIPFI VVGGIKFIEK
RHIKDILALV KILYNPNDTI AWHRILTLFS GVGDVTASKI TQAITSSNDS LQPLLDPKLT
KNKAPINELY HVLIKAQQQA TVADILQTLI DFYAPILKTL EDNWRERSED FRVLINLAQE
HSSLDNFLEN LALDPPNDSV AVMTNPEDKQ TDAVTISTIH SAKGLEWPVV FVNALVDGLM
PHHRSLHEFE ALEEERKLFY VACSRAKTHL YLTAPDYFSS FAGYFDKISR FISEVATDTL
QVDAAESIRK SDDSQSNDPE WW
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