Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4602 |
Symbol | |
ID | 5211588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 5767666 |
End bp | 5768379 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640598181 |
Product | ribonuclease III |
Protein accession | YP_001278883 |
Protein GI | 148658678 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGAAGT CGGTTGACGA ACTCAGTGCG CGTCTCGGCG TCACGTTTTC TGATCAACGT CTGCTCGAGC AGGCGCTGAC CCATAGTTCT TTCCTCAATG AGCATGTCGA AGAGCGCATG CACCTGGACA GCAACGAACG CCTGGAGTTT CTCGGTGATG CGATCATCAA TTTTCTGGCA GCCAGGCTGG TATTTGAACG CTTTCCTGAC GCTGGCGAGG GAGAGTTGAC CGCCTGGCGC ACAGCGTTGA TCCGCACCGA GACGCTTGCC GGTTTTGCAC AGCGCTACAA TCTTGGTGCA TATGTGCTGC TGGCGCGTGG CGAGGAATCA AGTGGCGCAC GTCAGCGCCA GGCGCTCCTG GCAGATACGT TCGAGGCAGT TATTGCAGCT CTCTTCCTCG ATCAGGGTCT CAATGCTGTG CGGACCTTTC TTCTACCACT CTTCGAGGCG GAGCTTGCGT CGTTGCCGGA TCGCACACTG CCGGTCGATT ACAAGAGCAG GCTTCAGGCG CGCATCCAGG CAGAGCGTCG CGTGACCCCG CGTTATCACG AGATTGATCG AAGCGGACCG GAGCATCGTC CCGAATTCAC CGTCGAGGTG CGCGCAGGCG AAGAGCGCCT CGGAACCGGA AAAGGTCCCA GCAAACAGGC GGCGGAACAG GCGGCGGCGC GCGCAGCGCT CGATGCGCTT GAGGGTGGGA CGGATGGGCG TTGA
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Protein sequence | MRKSVDELSA RLGVTFSDQR LLEQALTHSS FLNEHVEERM HLDSNERLEF LGDAIINFLA ARLVFERFPD AGEGELTAWR TALIRTETLA GFAQRYNLGA YVLLARGEES SGARQRQALL ADTFEAVIAA LFLDQGLNAV RTFLLPLFEA ELASLPDRTL PVDYKSRLQA RIQAERRVTP RYHEIDRSGP EHRPEFTVEV RAGEERLGTG KGPSKQAAEQ AAARAALDAL EGGTDGR
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