Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4519 |
Symbol | |
ID | 5211504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5666353 |
End bp | 5667870 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640598097 |
Product | cell envelope-related transcriptional attenuator |
Protein accession | YP_001278800 |
Protein GI | 148658595 |
COG category | [K] Transcription |
COG ID | [COG1316] Transcriptional regulator |
TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCGCC AGACCCTGGA GTGTCGTGAA GCGCGCCAGT TGATCGATTG GGGCGTCTCT CCCGGTTCAA CGCGACCCGA ACGTCGCGCG CTTGGATTTC ACCTGGCGCG CTGCGCGGCG TGTCGCGCAT ACCGCGCGCA GCAGAATGAC ACATTGCTTG CCACGTTGCT GGACACGCCA CCCTGCCACA CGTTGCCGCC ATCGGCAGAT CACAGGCGAT CGCCGCATCC GATCCGCCTG ATCCGCGCGA TCAGCCTGAC CCTGACGGGC ATTGCCGCTG TGCTGACCCT CATCTTCGTG GGTCGGATGG CGGTGGCATT CGCTGCCATT CTTGGTCATA TGGACGCAAT GACGGGAAAT GCCGGGCAGA CCCTGGCAGG ATCGTCACCG GGAACACTGC CGACCGAACT GGCGACACTC ATTCCGCCGA CACTGCCTCC CCCCGCCTGG GCTTCCGAAG AAACTTCGAC GACCTCCACT CCTCCGGCGA CTGCGACAGT TGCAGAAACC ACAGCGCCGA CGACGCCAAC CGCCGCGTCA GACGAGATGC CGCCTGCGTC GGTTACTCCA GAGGAACCAT CGCCAACCAT CGTTGCAGCA TCGCCGGTTT TGCCAACGAT CACACCCATT CCGCTCCGAC CTGACTATCG ACCAGGCGCG CCGACGCCAG CGCTTGCTCC GCTTCCCATA CTGCCCGACG GGTATCAACG CGCCCCGCCA GCAGGTCAGG CAATCACCGT CCTTCTGCTG GGAATCGACC GACGACCGGG TGAGACGTTC CCTTCACGCG CCGATGCAAT TCTCATTGCG CGGATCGAAC CGGAGCGTCG ACGCATTGCG CTCCTCTCGC TACCACGCGA CCTGGTTGTG CCGATTCCCG GATGGGGATG GTCGCGGATC AACGCAGCAA TGGTCTATGG TGACCTGGAT CCCGCGCTCG GAGGCGGGAT CGCGCTCACC CGCCGCACAG TCAGCGAGTT TCTTTCTGTT CCCATCGATT ACACGGTCAT CGTCGATTTT ACCGGCTTCA TCGGCGCAAT CGACGCCATT GGCGGCGTTA CCATCGATGT ACCGGTCGAA CTCTACGATC CGCTCTATCC AACCATGGAT TACGGATACA CTGTCGCGCA TTTTCGTCCC GGCATCCAGC ACATGGATGG GGGGCGCGCC TTGATGTACG CGCGCATCCG GCACATGGAC AGCGACTGGG AACGGATGAA GCGCCAGCAG ACGGTGATTA TCGCCGCGCT CAACCAGGTG CGTGAACGTA ACACTCTCGG ACAGATTGAG AGCATCGCCG CGCTGACCGG AGCGTTGCGC GGTTTTGTCA TTACCGATAT TCCTGAAACG CAACTCCTCG GTCTGGCATG GGCATTCCGT GACTTCGCGC CGGATCAGGT TGAGCGTTAT GCGCTCGACG CCAGTTCTGT CAGCATCGGC GCACCAGGCG ACCCATATGC GCAGTACGCT CTGCCGGGCG CCATCGAGCG CCTGCGCGAT CGATTGCTGG GACGTTAG
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Protein sequence | MDRQTLECRE ARQLIDWGVS PGSTRPERRA LGFHLARCAA CRAYRAQQND TLLATLLDTP PCHTLPPSAD HRRSPHPIRL IRAISLTLTG IAAVLTLIFV GRMAVAFAAI LGHMDAMTGN AGQTLAGSSP GTLPTELATL IPPTLPPPAW ASEETSTTST PPATATVAET TAPTTPTAAS DEMPPASVTP EEPSPTIVAA SPVLPTITPI PLRPDYRPGA PTPALAPLPI LPDGYQRAPP AGQAITVLLL GIDRRPGETF PSRADAILIA RIEPERRRIA LLSLPRDLVV PIPGWGWSRI NAAMVYGDLD PALGGGIALT RRTVSEFLSV PIDYTVIVDF TGFIGAIDAI GGVTIDVPVE LYDPLYPTMD YGYTVAHFRP GIQHMDGGRA LMYARIRHMD SDWERMKRQQ TVIIAALNQV RERNTLGQIE SIAALTGALR GFVITDIPET QLLGLAWAFR DFAPDQVERY ALDASSVSIG APGDPYAQYA LPGAIERLRD RLLGR
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