Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_4395 |
Symbol | |
ID | 5211380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 5510143 |
End bp | 5511462 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640597975 |
Product | hypothetical protein |
Protein accession | YP_001278678 |
Protein GI | 148658473 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0154532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACGTTG AAACTGGCCT GGTTCTGGCA GGTATTATCG TCAGTCTCCT GCTCCTGGCA TTCACGTCAG CGGTCGATGC TGCAATGACC GCGATTGGAC GCCATCGTCT CGGGCTGCTT CACGAGAGCG ACAGGCGGCG TGCGCAACTG ATCGACCGCC TGCTTACCGA ACCGTACCGC TTCAAAGCGA CCATTCTGCT TCTCAACAGC GCTGCAACCA TTGCTGCAAC TGCGCTGCTG TTGCGCTTAT GCGCCGGTCA ACCGCTTCAG TGGCAGATCG CTGCGCTTGG CGGGTTGTTG TTCCTTATTC TGATCTTCGC CGAAGCATTG CCCAAGGCGC TGGCGATCAG CAATCCCACC CATGCTGCGC AGGCGCTTGC CGGTCCGATG GCGCTCAGCG CCCGCGTGCT GGCGCCGTTG ATCTGGGTGG TCGAACTGCT GACCCGCCCG TTCATCCGCG TCGCCAGCGG TCAGGCGGCG CCACAGATGC CGCTGGTGAC CGAAGAAGAA CTGCGTCTGC TGGTGAATGT CGGCGAAGAA GAGGGGTTGA TCGAACCGGA TGAGCGGGAA ATGATCGAGG GCATCTTTTC CTTCGGCGAT ACAACCGTGC GCGAAGTGAT GATCCCGCGG GTCGATATTG TCGCGCTCGA GGAAACGGCG TCCATCGATG AGGCGCTGAA TGTGATCATC GCCAAAGGAC ATTCGCGTAT TCCGGTGTAC CGCGAGACCA TCGATCATAT TGTGGGGATT CTGTACGCCA AAGATCTGCT GCTCTGGTTG CGCTCCGGGC AGCGAGAGGC GTCAATAGGA TCACTGCTGC GAACCGCGCA TTTCGTCCCC GATACGATGA AAGTCGATGC CCTGCTCAAG GATTTGCAAG CGCGCAAAGT GCACCTGGCG ATCGTCGTCG ATGAGTATGG CGGCACCGCC GGGCTGGTTA CCATCGAAGA TGTGATCGAA GAGATCGTCG GGGAAATTCA GGATGAGTAC GACGTCGATG AGCAACCGAT CACAGAACTT GGCGCTGGCG ATCTGGAGGT GGATGCACGC GTTCCGATTG ATGACATTAA TGACCTGACC GGTCTGCGCC TGACGTCGGA AGAGTCGGAT CGGATCGGCG GGATCGTGTT CGAGCGCCTG GGTCGCGTGC CGAAGGTTGG CGACACGGTG CATCTGGATG GCGATGTGAC CATCACGGTG CTTTCGATGG ATGGGTTACG CCTGCGGCGA CTGCGCCTGC AGTACCGTTT ACCGCAGGAA AACGAAGTTC ACGCTGTGCG CGACAATGAG GATCAGGAAC ATGCACACCC TGACACCTGA
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Protein sequence | MDVETGLVLA GIIVSLLLLA FTSAVDAAMT AIGRHRLGLL HESDRRRAQL IDRLLTEPYR FKATILLLNS AATIAATALL LRLCAGQPLQ WQIAALGGLL FLILIFAEAL PKALAISNPT HAAQALAGPM ALSARVLAPL IWVVELLTRP FIRVASGQAA PQMPLVTEEE LRLLVNVGEE EGLIEPDERE MIEGIFSFGD TTVREVMIPR VDIVALEETA SIDEALNVII AKGHSRIPVY RETIDHIVGI LYAKDLLLWL RSGQREASIG SLLRTAHFVP DTMKVDALLK DLQARKVHLA IVVDEYGGTA GLVTIEDVIE EIVGEIQDEY DVDEQPITEL GAGDLEVDAR VPIDDINDLT GLRLTSEESD RIGGIVFERL GRVPKVGDTV HLDGDVTITV LSMDGLRLRR LRLQYRLPQE NEVHAVRDNE DQEHAHPDT
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