| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3996 |
|---|
| Symbol | |
|---|
| ID | 5210979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 5000814 |
|---|
| End bp | 5001374 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640597587 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001278293 |
|---|
| Protein GI | 148658088 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCATCC ATATCGCGCG TCGGCAGTTC ACGGTTGATG ACTATCATCG GATGCGGGAA
GCGGGCATCC TGACCGAAGA TGACCGGGTG GAACTGATCG ACGGAGAGGT GCGGCGTATG
AGTCCTGTTG TCCCATTGCA TGCCGCGATC GTGAAACGCC TCAACACCTT GTTGATGCCC
CATATGGGCA CCTTGATGCT GATCAGTGTC CAGGATCCGA TCCAACTCAA TGACGTTAGT
GAACCCGAAC CGGACATTGC GATTCTGCGG TACGACGCGA GTTATTACGC GCAGCACCAT
CCCACGCCAG AGGCGGTCCT CTTCGTGATA GAAGTGGCAG ATACGTCGCT TGACTATGAT
CGGGACGAAA AACTCCCACG GTATGCGGAG GCCGGTATTC GCGAAGCCTG GATCGTGGAT
GTGGAAGCGG AAATCGTCGT ACAATACACG CAGGCGATAG GGTGCCAGTA TCTGACCAGG
CGGGAATATC GACGGGGCGA CAGCATCACG TCTGTGGCAG CGCCCGGTAT TACCCTCCAG
GTCACCCACA TTTTCGGATA A
|
|---|
| Protein sequence | MAIHIARRQF TVDDYHRMRE AGILTEDDRV ELIDGEVRRM SPVVPLHAAI VKRLNTLLMP
HMGTLMLISV QDPIQLNDVS EPEPDIAILR YDASYYAQHH PTPEAVLFVI EVADTSLDYD
RDEKLPRYAE AGIREAWIVD VEAEIVVQYT QAIGCQYLTR REYRRGDSIT SVAAPGITLQ
VTHIFG
|
|---|
| |