| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3975 |
|---|
| Symbol | |
|---|
| ID | 5210958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 4973806 |
|---|
| End bp | 4974906 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640597567 |
|---|
| Product | methicillin resistance protein |
|---|
| Protein accession | YP_001278273 |
|---|
| Protein GI | 148658068 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2348] Uncharacterized protein involved in methicillin resistance |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.393695 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGATT GCGTGATCGA GCGACATCCA GAACGCGTAT CCCTAACCGT TGCGATGACG
GTTGTCACTC CTGATCCGGC AGCCTGGGAT GCTTTCGTGG CGGCGCATCC CGACGGTCAT
CTGCTGCAAT CGTCGCGGTG GGGAGCGCTC AAGGGACGGT TTGGCTGGAA ACCGCACCTG
CGCGCAGTCG TTGCTGGCGA AACTATTCAG GCTGGCGCGC TGGCGCTGGA AAAACAGCGA
CTCGCGTTGA GCGCATTGTA CGTCCCGCGC GGTCCGCTCT TCAGCGGCGA CCCGTCCATC
GATGCGCTGC TGCTCGACGA TATGATCCGG TTGGGACGGC GTCGCCGCGC GGTCTTCGTG
CGCATCGAGC CAAACATCAC AGAAGACGAC CCGCGCGCCG CTACACTGCA TTCCTTCCTG
CTAGACCGCG CGCTGCAACC GACGCCTCCC ATTCAACCGC GCAGCACCAT CCATCTCGAC
CTGACGCCGG AACCTGAACG TCTCCTGGCG GGAATGAGCA AAGGGCATCG CGCTGACATC
AAACGCGCAC TGCGCGAAGG GGTCGAGGTG CGCGAAGGCG GCACACCCGC CGATCTCGAT
GCGTTCTATG CCATCATGCA GGCAACGAGC GCACGCGCCG GGTTTGCCAT TCACTCGCCC
GCCTACTATG CGGCTGTCCT GGAACTCTTT GGCGATGCAG TGCGTTTATG GCTGGCGGAA
TATCGCGGTG CACCGGTGGC GACTGCGATG ACGGCGGTAT GGGGCGCGAT GGCGATCTAC
CTGTACAGCG GTTCAACGAC CGACGGGTTA CAATGCGGCG CCCAGCATGC CATTCAGTGG
CGCGCGATCC AGTGGGCGCG CGCGCGCGGC GCCGCACGGT ACGACTTCTG GGGCATCCCC
GACGCTATCG GGCAGGCTGC TGGAACTGCC GATCCAGCCG CGCGCGCGCG CCTCGACGCA
GCAGCGCAGC ACGACCCATT GTACGGCGTC TATCGCTTCA AAAAGGGATT TGGCGGCATC
ACAACCCGCT ATCTGCCAGC ATACGATCAG GTGGGCATGC CGCTGCTGTA CGCACTCTGG
CGACGGCATG CCATAGGGTA A
|
|---|
| Protein sequence | MADCVIERHP ERVSLTVAMT VVTPDPAAWD AFVAAHPDGH LLQSSRWGAL KGRFGWKPHL
RAVVAGETIQ AGALALEKQR LALSALYVPR GPLFSGDPSI DALLLDDMIR LGRRRRAVFV
RIEPNITEDD PRAATLHSFL LDRALQPTPP IQPRSTIHLD LTPEPERLLA GMSKGHRADI
KRALREGVEV REGGTPADLD AFYAIMQATS ARAGFAIHSP AYYAAVLELF GDAVRLWLAE
YRGAPVATAM TAVWGAMAIY LYSGSTTDGL QCGAQHAIQW RAIQWARARG AARYDFWGIP
DAIGQAAGTA DPAARARLDA AAQHDPLYGV YRFKKGFGGI TTRYLPAYDQ VGMPLLYALW
RRHAIG
|
|---|
| |