| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3446 |
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| Symbol | |
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| ID | 5210423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 4325962 |
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| End bp | 4327437 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640597041 |
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| Product | deoxyribodipyrimidine photo-lyase |
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| Protein accession | YP_001277754 |
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| Protein GI | 148657549 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
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| TIGRFAM ID | [TIGR02765] cryptochrome, DASH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.998107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.118354 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTGGA TTCACTGGTT TCGCCGCGAT CTGCGCCTGC GCGACAATCC GGCGCTCTCC
GGCGCGGCTG CCCGCAGCGG CGGGCGGGTC ATTCCGTTGT TCATTCTCGA TGACGCCATC
CTGCATGCGC CACGCACCGG CATGGCGCGG GTAGCGTTCA TGATCGCGGC GCTGCGCGAC
CTCGACGCCA GCCTGCGCGC GCGGGGCAGT CGCCTGGTGG TGCGACGTGG ACGACCATCC
GACGTGCTGC GCGATCTGGT GGGTGCGACC GGCGCCGTCG GCGTCTCGTG GAACCGCGAT
TATACCCCGT TTGCGCGCCA GCGCGATCAG CATATCGAAG CAATGCTGCG CGATCTGAAC
GTCGCAACGT TCATTGCTGC CGACGCCGTC ATTATGGAAC CCGACGACGT GCGCACCGAT
GACGGACGAC CATACACGGT CTACACGCCG TACCGGCGGC GCTGGCGCGC GCTGGTGGAA
CAGCGCCGCG ACGATGTGTT GCGCGCATAC GAGCCGCCGG TGTTGCAACC GGTTCCTGAT
GGCGTGGCGG ATCTTCCCAT CCCTGATAAT CCTGATCTCG ACGTGTCAGT CATACAGCGG
ATCCCCGCTG GCGGTGAAAC GACTGGAGCT GCGCGCCTGG CGGCGTTCCT CGATCCGCGC
GCCACCCATG GAATTGCGGG GTACGCCGAT GGACGCAACC TGCTGGCTGA ACCGGCGACC
TCGCGCTTAT CCCCCTATCT GCGATTTGGG TGCGTCGCGC CGCGCGCTGC CCTGCGCGCC
GCGCTGAACC TCCTCGACCG GGCGGGTGAA GAACAGGACG CCGAATGCGC CGCGACGCTC
ACCAGGTCAA TCGAAACCTG GATCGGCGAG CTTGCCTGGC GCGACTTCTA CTACCAGATT
CTCTGGCATC ATCCCCATGT GCTGCGCAGC GCGTTCAAAC CGCAGTACGA CGCGCTCGAA
TGGGAAAACG ATCCCGCGCT GTTCGATGCC TGGAAAGAAG GACGCACCGG CTACCCGGTT
GTCGATGCTG CGATGCGTCA GTTGAACCGG GAAGCCTGGA TGCACAACCG GGCGCGTATG
ATTGTCGCTT CCTTTCTGAC GAAAGACCTG CTGATCGACT GGCGCTGGGG CGAACGCTAT
TTCATGCAAC AACTGGTCGA TGGCGATCAC GCGGCCAACA ACGGCGGGTG GCAGTGGAGC
GCGGGAACCG GCACCGATGC GCAACCCTAC TTCCGCATCT TCAACCCTGT CAGTCAGGGG
CAAACGTTCG ATCCAAAGGG TGCGTATGTG CGGCGTTATC TACCAGAACT GGAAGCGGTT
CCAGACCGCT ACATTCATGC GCCCTGGACG ATGCCGTATG CTGAACAGCA GCGTTGCGGC
GTTATCATCG GGCGGGACTA TCCGGCGCCG GTTGTGGACC ATGCCGAACG GCGGGCGCGC
GCGCTTGCGC TCTATCGCGC CGTCTCTTCG CGTTGA
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| Protein sequence | MLWIHWFRRD LRLRDNPALS GAAARSGGRV IPLFILDDAI LHAPRTGMAR VAFMIAALRD
LDASLRARGS RLVVRRGRPS DVLRDLVGAT GAVGVSWNRD YTPFARQRDQ HIEAMLRDLN
VATFIAADAV IMEPDDVRTD DGRPYTVYTP YRRRWRALVE QRRDDVLRAY EPPVLQPVPD
GVADLPIPDN PDLDVSVIQR IPAGGETTGA ARLAAFLDPR ATHGIAGYAD GRNLLAEPAT
SRLSPYLRFG CVAPRAALRA ALNLLDRAGE EQDAECAATL TRSIETWIGE LAWRDFYYQI
LWHHPHVLRS AFKPQYDALE WENDPALFDA WKEGRTGYPV VDAAMRQLNR EAWMHNRARM
IVASFLTKDL LIDWRWGERY FMQQLVDGDH AANNGGWQWS AGTGTDAQPY FRIFNPVSQG
QTFDPKGAYV RRYLPELEAV PDRYIHAPWT MPYAEQQRCG VIIGRDYPAP VVDHAERRAR
ALALYRAVSS R
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