Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3401 |
Symbol | |
ID | 5210378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4275220 |
End bp | 4275675 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640596996 |
Product | single-strand binding protein |
Protein accession | YP_001277709 |
Protein GI | 148657504 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.413025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.54881 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAAGG ATCTCAACAA GGTGATGATC ATCGGGCGTC TCGGTAAAGA CCCTGAGATG CGCTATACGC CTGGTGGAAG CCCTGTAACG ACGTTCAGCG TCGCGACAGG ACGGCAGTGG AAAGACGGCA GCGGCGAATT GCACGAGGAG ACGGAATGGT TCAATGTAGT GACCTGGAAT AAACTGGCCG AGATCTGCCA CGAGCACCTG CGCAAATCCA GTCGCGTCTA TATCGAAGGG CGCCTCCAGA CTCGCCATTG GGAGGATCAG AACGGGGTGA CGCATTACCG CACTGAGGTT GTGGCGAGCG ATATGATCAT GCTCGACAGT CGCGGTCCTC GTGAGTCGTC GCAGTATGGC GATGAGCCGC CGTATCATCA CCCCGATCAT CGCCCTCAGC GCGGGCAGCA GTCGAAGGAC GATTTTGCCA TTGGTGATGA GGATATTCCG TTTTAG
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Protein sequence | MAKDLNKVMI IGRLGKDPEM RYTPGGSPVT TFSVATGRQW KDGSGELHEE TEWFNVVTWN KLAEICHEHL RKSSRVYIEG RLQTRHWEDQ NGVTHYRTEV VASDMIMLDS RGPRESSQYG DEPPYHHPDH RPQRGQQSKD DFAIGDEDIP F
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