Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3265 |
Symbol | |
ID | 5210240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 4115657 |
End bp | 4116877 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640596861 |
Product | geranylgeranyl reductase |
Protein accession | YP_001277576 |
Protein GI | 148657371 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02023] geranylgeranyl reductase [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0200135 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCCAG TCCTCGTGGT AGGCGCGTCG GTTGGCGGCT CGACGGCTGC CGATACGCTG GCGCGTGCAG GTGTGCCGGT TGTGATGCTT GAGCGTGATA CGTCGTATGT GAAGCCGTGC GGCGGTGCGG TGCCGCCGGT GGCGTTCACC GAGTTTGACC TGCCGGAAAC GCTGATCTCG CGCAAGGTGC ACCACGCCCT GGTGCATTCT CCGAGCGAAC GGGTCGTCGA AATCGAGGTT GCCGGCGTCA ATCACAGCGA TCAGGATTAT ATCGCCATGT GCTGCCGCGA GGAGTTCGAC CGCTACATCC GTCAGCGCGC CGTTCAGCGG GGTGCGATGT TGATCGAAGG TCAACTGGTC GATCTGGCGT TCGATAAGGA GGGTGTGACT GCAACGTATC GCGAACGGTT CGGCGGCGCC CGTCAACAGT TGCGCGTCAC GGCGGTGATC GGCGCGGATG GGGCGTATTC GACAACGGCG AAACTGCTGG GTTTGCCCAA TCTGCCGCGC TGTATCGCCA TTCAGCAGCG CATTCGCCTT CCGGCAGGCA AGATGGCGCG CTGGGAGGAT ACCGCCGATC TGTACCTGGG TCCTGAGGTC AGCCCCGACC TGTATGCCTG GGCGTTTCCC AAGAGCGATC ATGTCGCCGT TGGCATCGGA ACGGGACCTG CCCATAGCAA ACGCGCTCGT GAATTGCTTG CGAATTTGAA GCATCGTATC CGCAGAGACC TGGAGGGCGG CGAGATCATT CTCGAAGAGG CGCATGCGCT GCCGATGGAA CCGCGTGAAC ATATGGCGTT TGAGCGTGCA ATGCTCATCG GTGACGCGGC GGGTCTGGTG GTGCACACCT CTGGCGAAGG TATCTACTGG GCGATGAAGA GCGGCAAAAT GGCGGCTGAA ACGCTGATCG AGAGTCTGCC GGACGCATCG CTCACTGCGC TACGGCGCTA TGAGCGTCGC TGGTGGAAGA CCTATGGCAC GATGTATCGT TTCCTGGTCT TCTTGCAGAA GTGGGGGTAC GGCAGCGCGC GGCAGATGGA AGTGTTCACC GACATGTGCC GCAATCTGGA TGTGCAACGA CTGACATTCG AGTCGTATAT GCACAAGACG ATGGCGCCGG TGCCGTGGCT GGCGCAGTTG CGGATGACGG CGGATATTAT CGCTGCCCAG GTGCGTCACT ATCTGCCGCG CCGTCGAACC GATCAACCGG CTGTCGCCTG A
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Protein sequence | MDPVLVVGAS VGGSTAADTL ARAGVPVVML ERDTSYVKPC GGAVPPVAFT EFDLPETLIS RKVHHALVHS PSERVVEIEV AGVNHSDQDY IAMCCREEFD RYIRQRAVQR GAMLIEGQLV DLAFDKEGVT ATYRERFGGA RQQLRVTAVI GADGAYSTTA KLLGLPNLPR CIAIQQRIRL PAGKMARWED TADLYLGPEV SPDLYAWAFP KSDHVAVGIG TGPAHSKRAR ELLANLKHRI RRDLEGGEII LEEAHALPME PREHMAFERA MLIGDAAGLV VHTSGEGIYW AMKSGKMAAE TLIESLPDAS LTALRRYERR WWKTYGTMYR FLVFLQKWGY GSARQMEVFT DMCRNLDVQR LTFESYMHKT MAPVPWLAQL RMTADIIAAQ VRHYLPRRRT DQPAVA
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