Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_3118 |
Symbol | recA |
ID | 5210087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3917502 |
End bp | 3918563 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640596710 |
Product | recombinase A |
Protein accession | YP_001277431 |
Protein GI | 148657226 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0468] RecA/RadA recombinase |
TIGRFAM ID | [TIGR02012] protein RecA |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000163831 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000179844 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCCCTCT CCCCGGAAAA GGAAAAGGCT CTGGCAGCAG CCATGAGCCA GATCGACCGC AAATACGGCA AGGGCTCGAT CATGCGGATG GGGGAAGTCA GTTCCAAACT GGCGATCGAA GTCATCCCCA CCGGGTCGAT TGCGCTCGAC ATTGCGCTGG GCGTCGGCGG CGTGCCACGG GGTCGGGTTG TCGAAATCTA CGGTCCGGAG TCCAGCGGTA AAACGACCCT GGCGCAGCAT ATCATCGCTG AGGCGCAGAA GATGGGCGGC ATCGCCGCCT TCATCGACGC CGAGCATGCG TTCGATCCGG TCTATGCAGC ACGATGCGGC GTTGATGTCA ACAATCTGCT GGTCTCGCAA CCCGATTACG GTGAGCAGGC GCTTGAGATC TGCGAAGCGC TGGTGCGCTC GAATGCGGTC GATGTCGTAG TGGTCGACTC GGTTGCTGCG CTGGTGCCGC GCGCTGAGAT CGAAGGCGAC ATGGGCGACT CGCTCCCCGG TCTGCAGGCG CGGTTAATGA GCCAGGCGCT GCGCAAACTT TCCGGCGCCA TCAGCAAATC ACGCGCGGTT GTCATTTTTC TCAACCAGCT CCGCCTGAAG ATCGGCGTGA TGTTCGGCTC GCCGGAGACT ACCACCGGCG GTCAGGCGCT GAAGTTCTAC GCATCGGTGC GGATGGACAT CCGCCGCATT GAGACGCTCA AGAACGGTCA GGAGACGATC GGCAGTCGCA CGCGGGTGAA GGTGGTCAAG AACAAGGTCG CGCCGCCCTT CCGCCAGGCG GAGTTCGATA TTATGCACAA CGAGGGCATC TCGCGCGCTG GCAATATCCT TGATGTCGGC GTCGAACTCG ACATCATTCG CAAGAGCGGC GCCTGGTTCT ATCTCGGCGA CGATCGCCTG GGTCAGGGGC GCGAAAATGC CAAGCAGTTC CTGAACGAAA ACCCGGCGCT GGCAGATGAA ATTGAGCGCC TGATCCGCGC TCACGCAATG GCGGCGCCGA TCTCGATTGT ATCGCCCAAA GAAGACGATG CCGTAGAAGA CGCAGGACTG TTCGAGGAAT AG
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Protein sequence | MALSPEKEKA LAAAMSQIDR KYGKGSIMRM GEVSSKLAIE VIPTGSIALD IALGVGGVPR GRVVEIYGPE SSGKTTLAQH IIAEAQKMGG IAAFIDAEHA FDPVYAARCG VDVNNLLVSQ PDYGEQALEI CEALVRSNAV DVVVVDSVAA LVPRAEIEGD MGDSLPGLQA RLMSQALRKL SGAISKSRAV VIFLNQLRLK IGVMFGSPET TTGGQALKFY ASVRMDIRRI ETLKNGQETI GSRTRVKVVK NKVAPPFRQA EFDIMHNEGI SRAGNILDVG VELDIIRKSG AWFYLGDDRL GQGRENAKQF LNENPALADE IERLIRAHAM AAPISIVSPK EDDAVEDAGL FEE
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