| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_3055 |
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| Symbol | |
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| ID | 5210023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3837147 |
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| End bp | 3838109 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640596647 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001277369 |
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| Protein GI | 148657164 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000100154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00643024 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACGCC TGACGATCTC CCCGCCGCTC GCTGCCGTGC TGCTGGCGAT TGTGTTGTTC
CTGCTCAGTG GATTCCTGCC CAACGGTTTT GGCGGCAATC TCGATGTGGC TGCTGCACAG
GCGGTTAATA TCGTGCGCCT CTCGGTCTTT CTGGGGATCA TCGCGGCAGG ACAGACTCTG
GTGATTATCA GCGGCAACGA GGGGATCGAT CTCTCCACAG GCGCGGTGGT GACACTGACG
GCCATTCTGA CCTATACAAT CGTCAACGGC AGGAACGAAC AGGTGCTGCC GGCGCTCCTG
GCGGTGCTGA TTGTTGGGGG GATGATCGGG TTGATCAACG GCGCCGGTGT GGCGTTTCTC
AACATTGCGC CGCTGGTGAT GACCCTCGGC ATGGCGGGTG TTGTCAGCGG ATTGATCCTG
GTCATTACCC AGGGGAATGT CAGCGGCGCG GTTGCGCCGA TCATGACCCA ACTGATCGCC
CGTCCGGTGT TTCAGGGCAT TCCCGGCGCC ATTCTGATCT GGATCGTTTT TGCGGCGTTG
ATGTGGCTCC TGATCGAGCG CACAACCTAT GGCAGACATC TCTTCGCCAT CGGCACGAAT
CGGACTACGG CGCGGCTCTC CGGCATTCGC GTCACCGCCG TGGTCATCGG AACCTATGCC
CTCTCCGGGA TGCTCGCCGG GCTTGGCGGC TTTCTGGTAG TCGGGAATAC CGGCGTTGTC
CACATTCGTA TTGGCGATCC CTTTCTCTTT CCTTCGATTG CGGCGGTCGC CGTCGGCGGC
ACATTGCTGA CCGGCGGCAA GGGAAGTTAC TTCGGCACAA TGGCGGGGGC GCTGGTGCTG
ACCCTGATCA CCAGCCTGCT GACGACCATG CAAATGCCAG AGTCGGTGCG ACGTATGGTA
TTGGGTGCGA CGTTGCTGGT CATGATCTCG ATCTATGGGC GTCAGCGCGG TTTTCGTCAG
TAA
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| Protein sequence | MKRLTISPPL AAVLLAIVLF LLSGFLPNGF GGNLDVAAAQ AVNIVRLSVF LGIIAAGQTL
VIISGNEGID LSTGAVVTLT AILTYTIVNG RNEQVLPALL AVLIVGGMIG LINGAGVAFL
NIAPLVMTLG MAGVVSGLIL VITQGNVSGA VAPIMTQLIA RPVFQGIPGA ILIWIVFAAL
MWLLIERTTY GRHLFAIGTN RTTARLSGIR VTAVVIGTYA LSGMLAGLGG FLVVGNTGVV
HIRIGDPFLF PSIAAVAVGG TLLTGGKGSY FGTMAGALVL TLITSLLTTM QMPESVRRMV
LGATLLVMIS IYGRQRGFRQ
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