Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2891 |
Symbol | |
ID | 5209860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 3608908 |
End bp | 3610314 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640596487 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001277209 |
Protein GI | 148657004 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1486] Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCCAA AAATCGTCTT CATCGGTGCG GGCAGCACTG TGTTCGCCAG AAATCTGATG GGCGACATTC TGAGCTTCCC CGAACTTGCC GACGCAACGC TGACGTTGTT CGATATTGAC CCGGAGCGCC TGCGCACCTC CGAGATTGTG GCGCACAAAG TCGCAGCAGC GCTCGATGCG CGCCCGACGA TTGAAGCGAC AACTGATCGC CGGCGCGCAC TCGACGGCGC CGACTATGCG ATCTGTATGA TCCAGGTCGG CGGGTATAAG CCTGCCACGG TGATCGACTT CGAGATCCCG AAGAAGTATG GTTTGCGCCA GACCATCGCC GACACGCTCG GCATCGGCGG GATTATGCGC GGGTTGCGCA CCATTCCGGT GTTGTTGTCG ATGTGCCGGG ATATGGAAGA GGTCTGCCCG GACGTCACCT TCCTGCAATA CGTTAATCCG ATGGCGATCA ACTGCTGGGC GATCAGTCGC GCCAGCCGGA TCAAGACCGT TGGCTTGTGC CACAGTGTGC AGGGCACCGC CGAACAACTG GCGCACGATA TTGGCGTGCC GGTCGAGGAG ATCAACTATA TCTGCGCCGG TATCAACCAT ATGGCGTTCT ACCTGCGGTT CGAGCGCAAC GGCGAAGACC TCTACCCGCT CATCCGCAAG GTCTATGACG AAGGGCGCGT GCCAGCGTGG AATCGGGTGC GGTACGAAGT CTTCCGTCGC CTCAGCTATT TTGTCACCGA ATCGAGTGAG CATTTCAGTG AATACACACC CTGGTTCATC AAGCGCGATC GCCCCGATCT GATCGAGCGT TTCAATATTC CGCTGGACGA GTACATCCGT CGCTGCGAGG TGCAACTGGC GGGTTGGGAA TTCGTGCAGT ACAAACTCGA CCATCCTGAA GCGACGAGCG CCGATCTGCG CGCGATGATG CATGCGCGCG CCAAAACCAA CCCATATCTG ACCGATGAGT TCATCGAGTA TGTCATCACA GCCGCCGAAG ACCTGGAGGC GGGAAAGGTC GTGCGTAGCC ACGAATACGG CTCGCTGATC ATCCACAGTA TGGAAACGGG TCAGCCGCGT GTTATTTATG GCAACGTGCC GAACGATGGT CTGATCGACA ACCTGCCACA GGGATGCTGC GTGGAAGTGC CGTGTCTGGT GGATAAAAAC GGCGTTCAGC CGACGAAGAT CGGCGCGTTG CCGCCCCATC TTGCCGCACT GATGCAAACC AATATCAACG TCCAGGCGCT CACTGTCGAG GCGGCGCTGA CCGGCAAACG CGAGCATATC TACCACGCAG CGATGCTCGA CCCGCATACC GCCGCCGAGC TCGACCTGGA TCAGATCTGG GCGCTGGTGG ATGACCTGAT CGCCGCGCAC GGCGACTGGT TGCCAGTGTA TCATTAG
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Protein sequence | MPPKIVFIGA GSTVFARNLM GDILSFPELA DATLTLFDID PERLRTSEIV AHKVAAALDA RPTIEATTDR RRALDGADYA ICMIQVGGYK PATVIDFEIP KKYGLRQTIA DTLGIGGIMR GLRTIPVLLS MCRDMEEVCP DVTFLQYVNP MAINCWAISR ASRIKTVGLC HSVQGTAEQL AHDIGVPVEE INYICAGINH MAFYLRFERN GEDLYPLIRK VYDEGRVPAW NRVRYEVFRR LSYFVTESSE HFSEYTPWFI KRDRPDLIER FNIPLDEYIR RCEVQLAGWE FVQYKLDHPE ATSADLRAMM HARAKTNPYL TDEFIEYVIT AAEDLEAGKV VRSHEYGSLI IHSMETGQPR VIYGNVPNDG LIDNLPQGCC VEVPCLVDKN GVQPTKIGAL PPHLAALMQT NINVQALTVE AALTGKREHI YHAAMLDPHT AAELDLDQIW ALVDDLIAAH GDWLPVYH
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