| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2627 |
|---|
| Symbol | |
|---|
| ID | 5209596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 3258557 |
|---|
| End bp | 3259063 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640596231 |
|---|
| Product | cyclic nucleotide-binding protein |
|---|
| Protein accession | YP_001276953 |
|---|
| Protein GI | 148656748 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAACTG GACTTTTGCA GATTTTGGCG GATCGCTACG CTGCAGGCGG GATGGAGTCG
GTTGAAGTGT TGCGTCTGCT GGAGCGTGTG CCGCTGTTTG CCGACCTGCC GCGCAACACG
CTGCGCGGAC TGGTCGCCAT CGCCGAACAG CGCACCTACC CGGCGCGCAC AGTGGTTGTG
CGCCAGAGGA CGCTGAGCGG GATATTCTTC ATCATTCGTA AGGGAACGGC GGCAGTCGTT
TGCCGCGAGG CAGCAACCAA CGGAGCGCCG GCAACGACCC GACCCATCGC GCGGTTGGGA
CCGCAGGAAT TCTTTGGTGA ACTCGAACTG CTGCGCAATG CGCCGCCGGT GGCAAGCGTC
ATCGCGCTCA CATCGCTCAC CGTGCTGGCA TTGCCGCATG CCGCCATCCA GGCGCTGGTT
CACAGCGATG GCGGCGTGTC GCGGAGGCTG GAACGGATCG GCAGCGGGCG GTTGAAGGCG
TTAGAGGGAG CGGAGCGCAG CGTGTAA
|
|---|
| Protein sequence | MITGLLQILA DRYAAGGMES VEVLRLLERV PLFADLPRNT LRGLVAIAEQ RTYPARTVVV
RQRTLSGIFF IIRKGTAAVV CREAATNGAP ATTRPIARLG PQEFFGELEL LRNAPPVASV
IALTSLTVLA LPHAAIQALV HSDGGVSRRL ERIGSGRLKA LEGAERSV
|
|---|
| |