| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2581 |
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| Symbol | |
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| ID | 5209550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 3195535 |
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| End bp | 3199086 |
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| Gene Length | 3552 bp |
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| Protein Length | 1183 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640596185 |
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| Product | transcriptional activator domain-containing protein |
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| Protein accession | YP_001276907 |
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| Protein GI | 148656702 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.808302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCGA TCCCGCCTTC TTTTCGCATT ATTCTCCTGG GTGATATTCG CTTCGAGGTT
GCAGAGGCAC ATACGGTTTT GCCACAGCGC GAGAGTTTGC GCCGCCTGGC AGTGCACCTG
GCGCTCCAAC CTCGTCAGCC GCTTGCGCGC AAACAACTGG CGTTCACCCT CTGGCCCGAC
GATGATCCCG CCAGTGCACT GGCAAACCTG CGCCGTCATC TGCATCTGTT GCGCACGCTC
CTGCCGCCTG TCGCCCGTGA GTGGCTGGTT GTTTCGAGCC AGCACGTTGT CTGGAATGCT
CCGCCTGACT GCTATGTCGA TGTGCATGCG TTCGAGCGCG AATGGGCGAC TGTGCAGGAC
ATGGAGGCTG CCGCCGGACT CTATCGTGGT GAACTGGCGC CGGGCATCGA CACCGACGAC
GATATTCTCG TTCGACGTGA GGAGTTGCGG CAGCGCTACC TGGCGCTGCT GCGATCACTG
GCGCACGCCT GGATGGAGCG CGGCGATTGG GATCGCGCCG GGCGGTGGGC GCGCCGGTTG
GTGACGCACG AGCCGTGGGA CGAAGACGCA GTGCGCCTGG CGATGACTGC TATGGCGCGT
GCGGGCAACC GCACTGCAGC GCTCGACATG TACCAGACGC TGGCGCGCGA TCTGCAACGT
GAGTTGCACG TCCAACCGGC GCCGGAGACG ACTGCGCTCT ACCACGACAT CCTGCACCGC
CGCCTGACGT GTGCCGCGCA GCCTGATCGT TCAACAGTTC CCGTGTTTAT CGGCCGCGCC
GATGAACTCC GCCAGTTGAC CGATCTGATG CGCAGCGCCG TGCAGGGGCA GGGACGAATC
GTGTTCGTCT CAGGTCAGCC CGGCGTGGGC AAAACATCGC TGGTGCAGGA GGCGATCCGG
AGGTTTGTCG ATCTGAACAA AGCGCAACCG GTGCATGTGT TCTACGGGTA TTGTCAACCA
ATGAGCAATG CCCGCGATGA CCGCCCGTAT GCACCGTGGC GACATATCCT GACCGCAGCG
GCGACACACC TTGCCCAAAG CGCGGGGAGC GCCGCAGAGT GGCTCAGTCG CCTGTTGCCG
CTCGTCCCTG ATCTGGCGGC GCTGCGTCCT GAACTGATCG CGTCGTCTCA ACCGGATGCC
GCCGCGCTGT GTTCCGCCAT ACGCCGGAGT GTGCAGGCGC TTGCGCTGCG CCGACCACTG
TTTCTGATCA TCGAGGATGT GCACTGGATC GATACCTGGT CGCTCGATGC GCTGATCGAT
CTGGCTGATG TCTGTCTCTC GCTCCCGCTG CTGATCATTG TCACCCACCG ATCCGGTTTC
ATGATGCCCT CGTTGCTGTC CGCCAAACGA ACCCTGCGCC GTCAGCGTTG CGCGTTCGAC
CTCCATGTCC AGCCACTCAC GCCGTCTGAA GCCAACCGCT TGCTGGAACA GGCGCTCGGA
AGCGCCATTG ATGCCGCGAC GCTCGAAGAG ATCAGGCGCT ATGCTGGCGG TATACCACTC
TTTTTGCGCG AGGCGATTGA CAGTCTGCGC GAATCGCAGC AGCAGCGTCT GTCGAAGGAA
AAGGGTCTGG CAGGATTGCG TGATTCGCTC AGGCTGCGAC TGCGCGATAT TGGCGAGCGC
AACCGTCATA TGCTGGAAGC GGCGGCTATC CTGGGTTTCT CGTTCGCCGA TGACGAATTG
CGGCACATGC TCAACTGGTT GCCATCGGCG TACGCATCGG CGCTGGACGA CCTGATCGCC
CGCCGGTTGT TGATCGATAC GGTCACTCAC GGCAGCGATG AGTACACGTT TTCGCACCAT
CTTATCCATC ATCTGATTCT GAGCGACATT CCTGCCGAAC GAGCCGCCCA CCTCCATGAA
CAGGCTGCCC GCAGTCTGGA GATGGTTCAT GCTGGTCGGA GCGGATACGC TGCCAGGATC
GCTACGCATT ACGAGACGGC AGGGTGTGCG CTTGCAGCAG CGCGTTTCTG GATGGTGCAT
GCCCGCGAGA GCACCGATCT GGCGGCATTC GATCAGGCAT TGAAGTCCGT TGCGCACGCC
GAATCGCTGC TGGCGGGAAC GAGTCGTGAG GTGCGCGAAG TGCAGGCGCA GGCTGCCGTG
CAACGCGGGG TGATTGCACT GCATCGGGGC GAGACGGCGT CGGCGCTCAG TTTGTTGCAG
CACGCAATCG AGCGGAGTCG TGCGTTTCCT TCGCTCTATA TGTACGCGCT GGTCACCCAT
GCCTACGCGC TCTCCACCCG CGATCACGCT GAAGAAGCGT ATGCAACCGC GTCGCAGGCG
CTCGAACTGG CAACGCTGTT GCACGACACC GCCAGCATCG TGCGCGCGCT CAATATTCGC
GGCGTCAGCG CCCTGATGCT TGGTCGGGTG CATGACGCCA TCGAGGACTT GCAGCATGCC
TGCGCCAGCA TTGATCAGAT GCGTCAGGAT GATGCCGATC TCCGCAGTGT GGTCGCACAG
ACGACGCAAA GCCTGAATCA TCTCGGAACG GCGCTGGTCT TCGCGCAGGA GTACACACAG
GCGCGCAAGA TACTCGATCA GACGGTTGCG ATGGCGCAGC ACAGCGGTCT GCGCCGATTA
GAAGCGGCTG CGCTGACCAT GATCGGTCAG ATGACGCTCA ACTGCGGTCG CTACGACGAC
GCGGTTCAGA TCTATACCCG ATCAATCGAC GTGGCAGGCG AGTCGTACAA ACCCGGTATG
TGGGGGAAAT ATGCCGGGCG TGGCTGGGCA TATGTGAGAA TGGGCGAATG CGCCGCAGCC
CGTCAGGATT TCACACTGGG TTTACAGGTC GCAGAACAGG TGAACAGCCA GTACGGGACG
CTGCTGATGC AGACCTACCT GACCTTCGTC GATCTTGCGC AGGGGCGCAT GCCCGCAATG
TCACTGACGC ACCTGGCAGC GCTCGCCAGT GACGCTCAGA TTCATCCGGT CGTGTATATC
GCCAGTCTGC TGGCGGGTCA TCTCTGGCGT CTGCTGGGGG ATCCACACCG GGCGATGGAA
ATGCACGAAC GCGCATTACA GGCGGCATAC GCGGCAAACG TGCCTTCATT TGTGCTGCAC
GCCCGCGCCC AGCAGGTCTG CGACCAGTTG CTGGCTGCGC CCGACGCCGC TGGATTTGCC
GGGGCGGATG CGATCATCGA GCAGGCGCGG TGCGCCGATG AACGCCCGAT CCAATCGCTC
GGATGGCTGG CGCGCGCTGG CGGTCTCTTT CGGCTCGGCC AGATCGATGA AGCCGTACTG
TCGGTGGAGA AGGGTGTGAT CATGGCGCGC GCCTGCCCCG ATCAACCGCT GATCGGCGAG
GGATTGGCGC TGCTGACGCA AATCCGGGCT GCCTCCGATC GCTCTGCGGC ATACAACGCA
GAACTGGCTG AAGCGCGGTT GATCGCTGAA CGATACTTTG CCCCGCTCGC CATCCCCCTG
ACTATGCCGC AGGCGCATGC ATTGCGCAGG ATGTGCCTGG AAGTTCTCCT CCCGTCAAGC
GCGCAATGCG TATCTGCCAG CAATCAACCG GCAGTCATTA ACGTTTCCCG GAAACGCCGC
GCAATGTCGT AA
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| Protein sequence | MASIPPSFRI ILLGDIRFEV AEAHTVLPQR ESLRRLAVHL ALQPRQPLAR KQLAFTLWPD
DDPASALANL RRHLHLLRTL LPPVAREWLV VSSQHVVWNA PPDCYVDVHA FEREWATVQD
MEAAAGLYRG ELAPGIDTDD DILVRREELR QRYLALLRSL AHAWMERGDW DRAGRWARRL
VTHEPWDEDA VRLAMTAMAR AGNRTAALDM YQTLARDLQR ELHVQPAPET TALYHDILHR
RLTCAAQPDR STVPVFIGRA DELRQLTDLM RSAVQGQGRI VFVSGQPGVG KTSLVQEAIR
RFVDLNKAQP VHVFYGYCQP MSNARDDRPY APWRHILTAA ATHLAQSAGS AAEWLSRLLP
LVPDLAALRP ELIASSQPDA AALCSAIRRS VQALALRRPL FLIIEDVHWI DTWSLDALID
LADVCLSLPL LIIVTHRSGF MMPSLLSAKR TLRRQRCAFD LHVQPLTPSE ANRLLEQALG
SAIDAATLEE IRRYAGGIPL FLREAIDSLR ESQQQRLSKE KGLAGLRDSL RLRLRDIGER
NRHMLEAAAI LGFSFADDEL RHMLNWLPSA YASALDDLIA RRLLIDTVTH GSDEYTFSHH
LIHHLILSDI PAERAAHLHE QAARSLEMVH AGRSGYAARI ATHYETAGCA LAAARFWMVH
ARESTDLAAF DQALKSVAHA ESLLAGTSRE VREVQAQAAV QRGVIALHRG ETASALSLLQ
HAIERSRAFP SLYMYALVTH AYALSTRDHA EEAYATASQA LELATLLHDT ASIVRALNIR
GVSALMLGRV HDAIEDLQHA CASIDQMRQD DADLRSVVAQ TTQSLNHLGT ALVFAQEYTQ
ARKILDQTVA MAQHSGLRRL EAAALTMIGQ MTLNCGRYDD AVQIYTRSID VAGESYKPGM
WGKYAGRGWA YVRMGECAAA RQDFTLGLQV AEQVNSQYGT LLMQTYLTFV DLAQGRMPAM
SLTHLAALAS DAQIHPVVYI ASLLAGHLWR LLGDPHRAME MHERALQAAY AANVPSFVLH
ARAQQVCDQL LAAPDAAGFA GADAIIEQAR CADERPIQSL GWLARAGGLF RLGQIDEAVL
SVEKGVIMAR ACPDQPLIGE GLALLTQIRA ASDRSAAYNA ELAEARLIAE RYFAPLAIPL
TMPQAHALRR MCLEVLLPSS AQCVSASNQP AVINVSRKRR AMS
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