| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2481 |
|---|
| Symbol | |
|---|
| ID | 5209450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 3068781 |
|---|
| End bp | 3069779 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640596086 |
|---|
| Product | PAS domain-containing protein |
|---|
| Protein accession | YP_001276808 |
|---|
| Protein GI | 148656603 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.259249 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTCG CCGACCTGAG CAAACTTTCC AGCGCCGATG CGCTCGAACT CGTCTCGCGT
CTGCACCAGG CCAATGAACA ACTCCAGGGC AGCGCCGTCA CGCTCTCGCG TCTTTCAGTC
GCCTTGCAGG ATTCGCTGGG TCCGGCGCCC GCCGGCGCGA TTGGCGCATT GCAAGCCATC
GGGCAGTTTC TGACGGTGCA GCATTCCTAC GAAGAACTGG CGACGCTTGT GCATCAGCAG
AGCGTCGAGG TTTTCGGCAT GGATGGCGGT GCGCTCTTCC TGCTCGACGA GAGCGGACTG
CTCACTCCAG TCGTGCCATC GGACGCTGTG TTACCCGATC CGTCAGCGCT CGAGCATATC
GCCGAAATCG CTCGACGGGC GCTCGATGCC GAGGCGATGA TCAGCGCGCC TGGCGAAAGC
GGCGCCTACC CGGCGTGCAT TGCGCTGCCG CTCTCGCGCA TGGGGCGGGA TGTAGGAGTG
GCGGTCATGT ATCGCGCGGC GCTGGAGGAA CCGGCGCTTT CTGCGGATAT GTGGGCAAAC
CTGACGATCT ATGCCGGGAC GCTGGGCGCA ATCTGCGCCG GGATGCGTCA GGCGGAAGCG
CTGCGGCGCG ATGCGCGCCT GCTCGAAAGC CTGCTTGCCG AACGCGCCCG TCAGGTGCAG
AACAGTCGCG ATCTGCTGCG CGTTGTGTTC GATCACCTGC CAGAGGGCGT GCTGCTGCTC
GACGCTGATG ATATGGTGCT CGCTGTCAAC CGTTTCTTCT CAGATCGCAT CGTCGGCGTA
CATCCGCGCG AACTCGTCGG CCGGTCGTAT GCCGAACTGC GTCAGCGACT CTGCCTGCAC
GGCATGCAGC GTATCAGCCA GGATGACGAG GGGCGCGCCG AGGTGGCGTT GCCCGATGCC
GGCGGACGAG TGCATACCTA CGAGGTCGAA CGCATGTCCA CTCAGACCGG TGATGGCGCG
GTGCTGGAGT TCTGGCGGGA GTTGAGCGTT GAGCGTTGA
|
|---|
| Protein sequence | MDLADLSKLS SADALELVSR LHQANEQLQG SAVTLSRLSV ALQDSLGPAP AGAIGALQAI
GQFLTVQHSY EELATLVHQQ SVEVFGMDGG ALFLLDESGL LTPVVPSDAV LPDPSALEHI
AEIARRALDA EAMISAPGES GAYPACIALP LSRMGRDVGV AVMYRAALEE PALSADMWAN
LTIYAGTLGA ICAGMRQAEA LRRDARLLES LLAERARQVQ NSRDLLRVVF DHLPEGVLLL
DADDMVLAVN RFFSDRIVGV HPRELVGRSY AELRQRLCLH GMQRISQDDE GRAEVALPDA
GGRVHTYEVE RMSTQTGDGA VLEFWRELSV ER
|
|---|
| |