Gene RoseRS_2429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_2429 
Symbol 
ID5209398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp3000573 
End bp3001121 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content60% 
IMG OID640596034 
ProductNUDIX hydrolase 
Protein accessionYP_001276756 
Protein GI148656551 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0417103 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCCC AACCCTGGCG CACACGCGCC TCACGCGACA TCTACCGCAA TACGTGGGTG 
CGGTTGCGTG AAGACATCGC AGAACTGCCT GATGGTCGCA CAACGATCTA CAGCGTCCTC
ACGCCGGGCA TTGGTCAATG CGTTGGCGTG CTCCCGTTTC TGCCCGATGG ACGGGTCGTC
ATGATCCGAC AGTATCGCTA TGTTTACGGC GAAGGGCACC GTTGGGAGAT GCCGACTGGC
GGGATGCACG AGGGAGAAAC GCCGGAAGAA GCCGCACAGC GCGAGTTGCA GGAGGAGATC
GGCTATCGCG CCGGACGTTT CGAGTGGATC AGCAGTTATT ACACCTCGAA GAGTGTTGTG
GAAGAAACGG CGCACCTGTT TCTTGGCTTC GATCTGACGC CATCGAGCCT GCCGCCCGAT
GAGACCGAAT TTCTCGAAAT CGAAGCCATG CCTTTTGAGC AGGTGCTGGA CATGGTACTG
CGCAGCGACA TCCGCGACAG CATGACAGTC ACGGCGGTGC TGCACGCTGC GCGACGGTTG
GGTGTGTAG
 
Protein sequence
MAPQPWRTRA SRDIYRNTWV RLREDIAELP DGRTTIYSVL TPGIGQCVGV LPFLPDGRVV 
MIRQYRYVYG EGHRWEMPTG GMHEGETPEE AAQRELQEEI GYRAGRFEWI SSYYTSKSVV
EETAHLFLGF DLTPSSLPPD ETEFLEIEAM PFEQVLDMVL RSDIRDSMTV TAVLHAARRL
GV