Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2428 |
Symbol | |
ID | 5209397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2999732 |
End bp | 3000478 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640596033 |
Product | peptidase C26 |
Protein accession | YP_001276755 |
Protein GI | 148656550 |
COG category | [R] General function prediction only |
COG ID | [COG2071] Predicted glutamine amidotransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0394761 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGAG TGTGCATCGG CATTACGTGT GGAACATTCT ACGACCGCGA CTGGTGTCCG CCCTCGATCG GGCACCGTAA GACCTATATT GACGCCGTCG TTGCCGCTGG CGGCGCGCCG TTCCTTATCC CGTCCATCGA CGACGAATCG GCGTTGCGTG CATTGTACGA ACGGATCGAT GGGTTGTTGC TGGCAGGCGG CGGCGACATC GAGCCGCACC ATTACGGCGA AGCGCCGCTT CCCGCGCTTG GCGTCGTCGA TGCGCTGCGC GACCGCACCG AACTGCCTCT GGTGCGCTGG GCAGTCGCTG AAGGGAAACC GGTGCTCGGC ATCTGCCGCG GCGCGCAGAT GGTCAACGTT GCACTTGGCG GCGCCCTGTA CCAGGATATC CCTTCACAGA TCGACACATC GCTCAATCAC TCCGATTCGT ATGCCCGCCA GGACTGGACA TATCTGGCGC ATACGTTGCG CCTGTCGCCC GATTCGCGCC TGCGACGGAT CCTTGGCAGT GATGAACTGC CGATCAACTC GTTGCACCAT CAGTCGATCA AAACGGTTGC ACCCGGGCTG GTTGCCGTCG GTTGGGCGCC GGACGGCGTT ATCGAAGCCA TCGAGGGCAC GAATGGTCAC TTTCTGATTG GCGTCCAGTG CCATCCCGAA GCGCTCCAGA GCGAGGTCGA TCCACGCTGG CGCGCGCTGT TCCGCCGCTT CATCGAGGCA TGCGTGCAGT CAAAGATCAC GGCGTAG
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Protein sequence | MSRVCIGITC GTFYDRDWCP PSIGHRKTYI DAVVAAGGAP FLIPSIDDES ALRALYERID GLLLAGGGDI EPHHYGEAPL PALGVVDALR DRTELPLVRW AVAEGKPVLG ICRGAQMVNV ALGGALYQDI PSQIDTSLNH SDSYARQDWT YLAHTLRLSP DSRLRRILGS DELPINSLHH QSIKTVAPGL VAVGWAPDGV IEAIEGTNGH FLIGVQCHPE ALQSEVDPRW RALFRRFIEA CVQSKITA
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