Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_2087 |
Symbol | |
ID | 5209049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 2578122 |
End bp | 2578790 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640595690 |
Product | TrkA domain-containing protein |
Protein accession | YP_001276419 |
Protein GI | 148656214 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.798772 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCCGGC TCAACGGAAA ACCAGAGTTT GCCGTCATTG GTCTTGGACG GTTTGGCAGC AGCCTGGCGC TTACGCTGGC AGAACGCGGG TTTAGCGTGC TGGGCATTGA TCGCGACCGC TCCATCGTGC AGGCGCTCGC CGACCGGTTG ACGCAAACTG TTGCGCTCGA TTCGACTGAT GAGCAGGCGC TGCGTGCGGT CGATATCCCT TCGTTCGATA CGGTCGTCGT CGCTATCGGA TCGAATTTCG AGGCGAACCT GCTGACGACG GTCGCGGTCA AGTCGCTCGG CGTGCCACAC GTTATCTGCA AGGCGACGAC AGATCGCCAG CGGACGATTC TGTTGCGGGT TGGCGCCGAT CGTGTCATCC TGCCGGAACA CGAGGCGGGT TGTCGTCTGG CGCAGGAACT CGCCGCTCCT GGCATGGTTG ATCAAATTGC GCTGGGTGTC GAGCATAGCA TTACCGAGTT GCGCGTTCCG TCGTCGTTCG TCGGGCATAC GTTGCGCGAA TGCGATTTAC GCCGCCGCTA CGGGGTGACG GTGCTGGCAG TCAAGCGCGG CGAACATCTG ACCGTCTTCC CCGCGCCGGA TTTTACCTTT GCGTCGGGCG ATCTGCTGGC GGTCATTGGT GAGAACAGCA GCATCACACG CATCGCTGAA CTGAAATGA
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Protein sequence | MPRLNGKPEF AVIGLGRFGS SLALTLAERG FSVLGIDRDR SIVQALADRL TQTVALDSTD EQALRAVDIP SFDTVVVAIG SNFEANLLTT VAVKSLGVPH VICKATTDRQ RTILLRVGAD RVILPEHEAG CRLAQELAAP GMVDQIALGV EHSITELRVP SSFVGHTLRE CDLRRRYGVT VLAVKRGEHL TVFPAPDFTF ASGDLLAVIG ENSSITRIAE LK
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