Gene RoseRS_1880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1880 
Symbol 
ID5208840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp2332587 
End bp2333426 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content62% 
IMG OID640595488 
Productabortive infection protein 
Protein accessionYP_001276219 
Protein GI148656014 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.124856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCC TGCATCCGCC GGCGCCGCGT CTTCCGCTTC CTGGTGCACC ACGCGCCGCG 
ATTGGCGCCC TGGTTGCAGA CCTGCTGATC GCAATCGGCA TGGCGCTGAT CCTCAGCGTT
GCAGTGGTCG GCGTGATGAT CGGATTGCGC GCCGCGCAGA CCGGTCTTGA TGTCAATGCC
CTCGGTCAAC TGAATCCGCA GGAGATCACG CGGCTGATCG GCGTCGATGG GATGCTGACG
CTGCTCCTGC TGCAAAATCT CGTCTTCATT GGCGTCGCGG TCATACGAGT GCGGGCGCTG
CGGCGCGAAC CGCTCGCGGT GCTGGGGTTC AGCGCGCCGC AACCGCTGCG TCTGGCGCTG
TTCGGCGTCG GGTTGGGAGT GCTGGCGCTC TTCGTGAATG GCATTGTCGG CATGATCTTC
GTCAGTGCTG GCATTCGTCA GAACCAGGCG GCGCTCTATC CGTTGTTTCC CGGCGATTAT
CTGGGGCAGG CATTGTTTTT TGTCGGGGCG GCAATCCTGG CGCCGATCGG TGAAGAAGTG
TTGTTCCGCG GCTACCTCTT CGGCTCCCTC CGCCGGCTTG CAGGTGACTC ACGTGCAGGC
ATCGTCATCG CCTACGGCGT CAGCGCACTG GTATTCGCCC TGGCGCACTC GCTGGCAGCC
AGCGAAGGGG TGATTGCGCT GCTCGTTCCG TCGTTCCTGA TCGGTCTGGT GTTCGCCTGG
GGATTTGATC GCAGCGGCAG TTTGCTTCCC GGCATCGTCG CGCACGCGCT GAATAACAGT
ATCGCATTTG CGGCATTACT GACATGCATC AACAATCCGG GCGTATGCCC GCAGGTGTGA
 
Protein sequence
METLHPPAPR LPLPGAPRAA IGALVADLLI AIGMALILSV AVVGVMIGLR AAQTGLDVNA 
LGQLNPQEIT RLIGVDGMLT LLLLQNLVFI GVAVIRVRAL RREPLAVLGF SAPQPLRLAL
FGVGLGVLAL FVNGIVGMIF VSAGIRQNQA ALYPLFPGDY LGQALFFVGA AILAPIGEEV
LFRGYLFGSL RRLAGDSRAG IVIAYGVSAL VFALAHSLAA SEGVIALLVP SFLIGLVFAW
GFDRSGSLLP GIVAHALNNS IAFAALLTCI NNPGVCPQV