Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1880 |
Symbol | |
ID | 5208840 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 2332587 |
End bp | 2333426 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640595488 |
Product | abortive infection protein |
Protein accession | YP_001276219 |
Protein GI | 148656014 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.124856 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCC TGCATCCGCC GGCGCCGCGT CTTCCGCTTC CTGGTGCACC ACGCGCCGCG ATTGGCGCCC TGGTTGCAGA CCTGCTGATC GCAATCGGCA TGGCGCTGAT CCTCAGCGTT GCAGTGGTCG GCGTGATGAT CGGATTGCGC GCCGCGCAGA CCGGTCTTGA TGTCAATGCC CTCGGTCAAC TGAATCCGCA GGAGATCACG CGGCTGATCG GCGTCGATGG GATGCTGACG CTGCTCCTGC TGCAAAATCT CGTCTTCATT GGCGTCGCGG TCATACGAGT GCGGGCGCTG CGGCGCGAAC CGCTCGCGGT GCTGGGGTTC AGCGCGCCGC AACCGCTGCG TCTGGCGCTG TTCGGCGTCG GGTTGGGAGT GCTGGCGCTC TTCGTGAATG GCATTGTCGG CATGATCTTC GTCAGTGCTG GCATTCGTCA GAACCAGGCG GCGCTCTATC CGTTGTTTCC CGGCGATTAT CTGGGGCAGG CATTGTTTTT TGTCGGGGCG GCAATCCTGG CGCCGATCGG TGAAGAAGTG TTGTTCCGCG GCTACCTCTT CGGCTCCCTC CGCCGGCTTG CAGGTGACTC ACGTGCAGGC ATCGTCATCG CCTACGGCGT CAGCGCACTG GTATTCGCCC TGGCGCACTC GCTGGCAGCC AGCGAAGGGG TGATTGCGCT GCTCGTTCCG TCGTTCCTGA TCGGTCTGGT GTTCGCCTGG GGATTTGATC GCAGCGGCAG TTTGCTTCCC GGCATCGTCG CGCACGCGCT GAATAACAGT ATCGCATTTG CGGCATTACT GACATGCATC AACAATCCGG GCGTATGCCC GCAGGTGTGA
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Protein sequence | METLHPPAPR LPLPGAPRAA IGALVADLLI AIGMALILSV AVVGVMIGLR AAQTGLDVNA LGQLNPQEIT RLIGVDGMLT LLLLQNLVFI GVAVIRVRAL RREPLAVLGF SAPQPLRLAL FGVGLGVLAL FVNGIVGMIF VSAGIRQNQA ALYPLFPGDY LGQALFFVGA AILAPIGEEV LFRGYLFGSL RRLAGDSRAG IVIAYGVSAL VFALAHSLAA SEGVIALLVP SFLIGLVFAW GFDRSGSLLP GIVAHALNNS IAFAALLTCI NNPGVCPQV
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