Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1580 |
Symbol | |
ID | 5208535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1932595 |
End bp | 1933524 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640595186 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_001275922 |
Protein GI | 148655717 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0863941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATCG CAATCGGCGA TCTGGTATGG GATGTTCTGG TAAAGCCGGA CGGACTGCTG CTTCCTGGCG GTGACACCAC CGGCAGCATC AAACTTGCGC CGGGGGGATC GGCGGCAAAC GTGGCTGCAT GGGTTGCGCG CTGCGGCGCG CCTGCCGGGT TCATCGGCGC GCTGGGCGCG GATGTGTTCG GCGATCTCAT CGCTGCCGAC CTGCAACGCG AGGGGGTCGA GACGCATATT GTTCGCCTGC GCCACAGTGA AACCGGCGTG GTTCTGGCGC TGATTGATCG CGCCGGGCAG CGAAGTATGG TAACCAACCG TGGCGCCGAT CATCAACTTA TGCCGGATAT GACGCCGGAA GGCGTGTTGC GTTCGTGCAG CCATCTCCAT GTTACCGGAT GGTCGCTCTT CAGCGACCCG CCGCGCGCCG CCGCCCTGCA TGCTGCACGC ATCGCCAGCG CATTCGGCGC CACCATTTCG TTCGACCCGG CATCGTACCA GATCATCCGC GAGATCGGGC ACGATCAGTT CGACCGGATC ACCGCCGATC TGCCGGTGGA CATGCTGTTC CCCAACCGCG ACGAGGGGGA AGCGCTGACC GGTGAACGCG AGCCGCAGGC AATTGCGGCA GCGCTGCGCG AACGTTTCCC CGGCGCGCTG GTGGCGCTCA AACTGGATCG GGATGGATGC TTTATCATGA CGCACACGCT GATAGCGCAT ATTCCCGGAC AGGTCATCGG CACGCCGGTT GACACGACCG GTGCGGGCGA TGCCTTCAAC GGCGCATTTC TGGCGCGTTA CCTGACCACC GGCGACGCCG CTGGCGCTGC GCGTTTTGCC AACCAGATCG GGGCGTGGGT GGCGCAGCGG AGCGGCGCGC GCCCGCCGAT CGACGACGAA CTCCGCCAGA TTCTTAGCGA TAGCCGATAG
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Protein sequence | MIIAIGDLVW DVLVKPDGLL LPGGDTTGSI KLAPGGSAAN VAAWVARCGA PAGFIGALGA DVFGDLIAAD LQREGVETHI VRLRHSETGV VLALIDRAGQ RSMVTNRGAD HQLMPDMTPE GVLRSCSHLH VTGWSLFSDP PRAAALHAAR IASAFGATIS FDPASYQIIR EIGHDQFDRI TADLPVDMLF PNRDEGEALT GEREPQAIAA ALRERFPGAL VALKLDRDGC FIMTHTLIAH IPGQVIGTPV DTTGAGDAFN GAFLARYLTT GDAAGAARFA NQIGAWVAQR SGARPPIDDE LRQILSDSR
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