Gene RoseRS_0719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0719 
Symbol 
ID5207658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp888483 
End bp888872 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content59% 
IMG OID640594333 
ProductNifU domain-containing protein 
Protein accessionYP_001275085 
Protein GI148654880 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01994] SUF system FeS assembly protein, NifU family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0403016 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGCG CGGCGCTCAT TGCGCGTCTG CTGAACCATT ATGAACATCC ACGCCATCGC 
GGTCCCCTTG TCGATGCGGA TGTGACACTG ACCGGCGGTC ATCCTGAATG CGGCGACGTC
ATCACCATCT ATCTGAAGGT TGAACCGCCG GATCGCATCA CAGCAGTCTC CTTTGAGGGG
CGCGGGTGCA CAATTTCGCA GGCGGCGGCT TCGATACTGA CCGAACTCGC TGCCGGTGCG
ACATTTGCAG CAGTTGAGAC GATGACGCCG GACGAGATGA TCGATCTCCT GGAACGTGAA
GTGGTCGGAA CGCGACCGCG TTGTGCAACG CTGGCACTGC GGATATTGAA GGCAGCGATC
TCAACCTGCC GGATGGGAAA GATGTCGTGA
 
Protein sequence
MDRAALIARL LNHYEHPRHR GPLVDADVTL TGGHPECGDV ITIYLKVEPP DRITAVSFEG 
RGCTISQAAA SILTELAAGA TFAAVETMTP DEMIDLLERE VVGTRPRCAT LALRILKAAI
STCRMGKMS