| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0093 |
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| Symbol | |
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| ID | 5207026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 109432 |
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| End bp | 111246 |
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| Gene Length | 1815 bp |
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| Protein Length | 604 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640593725 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001274484 |
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| Protein GI | 148654279 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.503977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGAC AACGACTCAG AAGCGCCGCA TGGTTGATCG TGCTGCTTGC CGTTGCAGGC
ATCGCCCTGG CAGGTTGCAC AATTGAAGGC GGTGTTCCGA CCCCGACCAT CGCACCAACA
CGAGCGCCGA TCGGTCCGAT CCCCACCAGC GCGGTCATCG CTGAACGCAT GGCGGCGCGT
AGCGACACAT GGATGATCGG GATGGTCGAT CTTCCGCCGG ACATCTACCC GTATCCCCAA
TCGGCAGCGA CCCAGCGCGC AACGGCGCCG ATTACCGAAC TGCTGTTTCC GGCGCCGATC
CTGACCTACA ACTACGGGTA CACCGTGACC GGTGTCCTCG AGCGTATTCC GACCCTCGAC
AATGGTGATG CCGAACTGCG CAAGGTCGAT GTGTATCTGG ATGCGACCGG CGCGATAACC
ACGACAGCGA CCGATGTTGT TACCCAGGTT GATCAACTGG TCATCACCTT TCGCTGGAAC
CCGCAATTAC GCTGGTCTGA CGGCACACCC GTCACCGCTG ATGATTCGGT GTTCGCCTAC
GAACTGGCGA AAGCGGCGCC GCCGGGCGAT GCCGCCGCCG AGTTGCTGGC GCGGACAGTT
GCATACGAGA AGGTCGATGA CCATACGACG CGCGCCGTTC TGCGCCCGGA TTACGTTGGT
CCAGCGTATT TCATGAGTTA CTGGACTCCT CTGCCGCGCC ATCTGCTTCG GGGCGTTGAT
CCAGTGCGGG TGCGCGAGAG TGAGTTCGCG CAACGTCCAG TCGGATACGG TCCTTATGCA
CTTGTCGAGC GAACTTCCAC CGAACTGCGC TTCGAGCGCA ATCCGTATTA TTTCGGTCCG
GCGCCTTCCG CGTCACGCCT GGTGATCCGC GCTTTTGCCG ATCTTGAACT GTTGCGCGCC
AATCTGCTCA ACGGCAATCT TGACCTGGGA TTTGCCGATC GCATTCCGCC GGCAATGCTG
GATCGTTTCG CCAGCGATGC CAGCGAACAA ACCTTGCAGG TAATGACCGT TCCCAACCCT
ATCTGGGAGC ATATTGTGTT CAACCTGGAT GTTCCAATCC TTCAGGATAT TCGTGTGCGG
CGCGCTATCG CATACGGTAC GAACCGGCAG GCAATCGCCG ATGCGCTGTT CGGCGGGCGG
ACACCGGTGC TGGACAGTTG GGTGCTGCCG GGGGATCAAC TCGCCGCTCC GCCTGACCAC
TTGACCCGCT ACCCCTACGA TCCCGATCAG GCGCGACAGT TGCTTGAAGA GGCAGGATAT
GCCGATCCTG ACGGCGATGG CATCCGTGCC ACCGCCGAGG GGGTCGCACT GACGCTGCAA
TTGCTGACCA CCCAGGGGAG TGCAGTGCGC AGCGAGATTG CCCGGCGATT CCAGCAGGAT
ATGCACGCCC TCGGTATCGA AATCGAGATC AACGAAGCCC CATCCGAAGA GATGTTCGAT
GCCGACGGTC CTCTCTACCT GCGACAGTTC GATCTGGCGC TCTTTGGATG GATTGCCGGA
GCAGAGCCGG GCGGATTGCA ACTCTGGAGT TGCGCTGCGG TTCCCTCTGA GAGCAACGGG
TATCGCGGCG AAAACTTCGC CGGTTGGTGC TTCCGCGATG CCGATCGCGC CGTGCGAACC
GCCGATACAA CCCTTGATCC GGTCGAGCGC GCAGAAGCAT ATCTGCGTCA GCAGCAACTC
TGGACACAGG AACTGCCAGC GCTGCCCCTC TTTCAGCGGT TGAGCATCGT CGCGGCAAAC
CCCGGCGTCG AGGGGCTTTC GCCCGACGCC CTTGCCCCTG TGACGTGGAA TGTATCGGCG
TGGAAGCGGA AGTAA
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| Protein sequence | MIRQRLRSAA WLIVLLAVAG IALAGCTIEG GVPTPTIAPT RAPIGPIPTS AVIAERMAAR
SDTWMIGMVD LPPDIYPYPQ SAATQRATAP ITELLFPAPI LTYNYGYTVT GVLERIPTLD
NGDAELRKVD VYLDATGAIT TTATDVVTQV DQLVITFRWN PQLRWSDGTP VTADDSVFAY
ELAKAAPPGD AAAELLARTV AYEKVDDHTT RAVLRPDYVG PAYFMSYWTP LPRHLLRGVD
PVRVRESEFA QRPVGYGPYA LVERTSTELR FERNPYYFGP APSASRLVIR AFADLELLRA
NLLNGNLDLG FADRIPPAML DRFASDASEQ TLQVMTVPNP IWEHIVFNLD VPILQDIRVR
RAIAYGTNRQ AIADALFGGR TPVLDSWVLP GDQLAAPPDH LTRYPYDPDQ ARQLLEEAGY
ADPDGDGIRA TAEGVALTLQ LLTTQGSAVR SEIARRFQQD MHALGIEIEI NEAPSEEMFD
ADGPLYLRQF DLALFGWIAG AEPGGLQLWS CAAVPSESNG YRGENFAGWC FRDADRAVRT
ADTTLDPVER AEAYLRQQQL WTQELPALPL FQRLSIVAAN PGVEGLSPDA LAPVTWNVSA
WKRK
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