Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1483 |
Symbol | rplC |
ID | 5188492 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1528951 |
End bp | 1529610 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640591329 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_001272066 |
Protein GI | 148544696 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000000163613 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAAG GAATCTTAGG TAAAAAGGTT GGAATGACTC AAGTATTCAC TGACAATGGT GAATTAGTTC CAGTTACTGT TATCGATGTT ACACCAAACG TTGTAATGCA AATTAAGACC GTTGAAAACG ATGGTTACAG TGCTGTACAA CTTGGTTTTG ATGACAAGCG GGAAGTTTTG AGCAACAAAC CTGAACAAGG TCATGCAGCA AAAGCAAACA CGACCCCTAA GCGCTTCATC GGTGAAATCC GCGACGCTGA ATTAGGGGAC ATTAAAGTCG GAGACGAAGT TAAGGCTGAC GTTTTCGCAG AAGGTGAAAC TGTCGACGTT ACGGGTACTA CCAAGGGTCA TGGTTACCAA GGTAACATCC ATAAAGATAA CCAATCTCGT GGACCTATGG CACACGGTTC TCGTTACCAC CGTCGTCCTG GTTCATTGGG TGCCATTATC AACCGGGTTT TCAAGGGTAT GAAGCTTCCT GGTCGTATGG GTGGCAAGAC TGTTACCATG CAACACTTAC AAGTTGTTAA GGTTGATCTT GACAACAATG TATTACTCAT CAAGGGTAAT GTTCCTGGTG CAAACAAGTC TTACGTAACT ATTAAGAACT CAGTTAAGGC TAATACTAAG AAGAGTCTTA GCAAACAACA CAATAAATAA
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Protein sequence | MTKGILGKKV GMTQVFTDNG ELVPVTVIDV TPNVVMQIKT VENDGYSAVQ LGFDDKREVL SNKPEQGHAA KANTTPKRFI GEIRDAELGD IKVGDEVKAD VFAEGETVDV TGTTKGHGYQ GNIHKDNQSR GPMAHGSRYH RRPGSLGAII NRVFKGMKLP GRMGGKTVTM QHLQVVKVDL DNNVLLIKGN VPGANKSYVT IKNSVKANTK KSLSKQHNK
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