Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_1465 |
Symbol | rpmD |
ID | 5188561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | - |
Start bp | 1521153 |
End bp | 1521335 |
Gene Length | 183 bp |
Protein Length | 60 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640591311 |
Product | 50S ribosomal protein L30 |
Protein accession | YP_001272048 |
Protein GI | 148544678 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1841] Ribosomal protein L30/L7E |
TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000000201439 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTCAAG TAAAAGTTAC CTTAATTCAC AGTGTTGCCC ACCGACAACC TACTCAACGT CGTACTGTTA AGGCATTGGG ATTAGGTAAG ATCAATAGCT CAGTTATCTT ACCAGATAAT GCGGCAACAC GCGGTCAAAT TTTTAAGATC GCTCACTTGG TTTCTGTTGA AGAAGTTAAG TAA
|
Protein sequence | MAQVKVTLIH SVAHRQPTQR RTVKALGLGK INSSVILPDN AATRGQIFKI AHLVSVEEVK
|
| |