Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lreu_0530 |
Symbol | |
ID | 5189654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Lactobacillus reuteri DSM 20016 |
Kingdom | Bacteria |
Replicon accession | NC_009513 |
Strand | + |
Start bp | 593892 |
End bp | 594356 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640590337 |
Product | protein translocase subunit yajC |
Protein accession | YP_001271135 |
Protein GI | 148543765 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1862] Preprotein translocase subunit YajC |
TIGRFAM ID | [TIGR00739] preprotein translocase, YajC subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATAGTT TGAGTAGTTT TGTTCTTGGT GCTGCTTCAT CTAATAATGC AAGTGGTTAC TCAGGAATTA TTTTAATCAT CTTAATGGTA GCATTAATGT ACTTCTTTAT GATTCGCCCA CAACAAAAGC AACGTAAAGA ACACCAAGAG ATGATGAATG AATTACACCC AGGTGATGAA GTTGTTACGA TTGGTCGGAT GCATGGTAAG ATTGATTCAA TCAATAAGGC TGATCGGACA GTTACTTTAG ATTGTGAAGG GATCTACCTT ACTTTTGATA TGGTGGCAAT TGCCCGTGTT ATCAAACGAG CAGATGCACC AGCTAGTGAA GCTCCCCAAG ATAATAAAGC TGTTGCTAGT TCTGCAGCTG ACAGTTCTGC AGCTGCTTCA GCAGATAGCG CTGCTAGTGA GCCTGCATCT GCAGCGAGTG CTAGCGATGA ACAAAAAGAC AGCGAAGAAA AGTAA
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Protein sequence | MNSLSSFVLG AASSNNASGY SGIILIILMV ALMYFFMIRP QQKQRKEHQE MMNELHPGDE VVTIGRMHGK IDSINKADRT VTLDCEGIYL TFDMVAIARV IKRADAPASE APQDNKAVAS SAADSSAAAS ADSAASEPAS AASASDEQKD SEEK
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