Gene Lreu_0530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLreu_0530 
Symbol 
ID5189654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLactobacillus reuteri DSM 20016 
KingdomBacteria 
Replicon accessionNC_009513 
Strand
Start bp593892 
End bp594356 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content41% 
IMG OID640590337 
Productprotein translocase subunit yajC 
Protein accessionYP_001271135 
Protein GI148543765 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAATAGTT TGAGTAGTTT TGTTCTTGGT GCTGCTTCAT CTAATAATGC AAGTGGTTAC 
TCAGGAATTA TTTTAATCAT CTTAATGGTA GCATTAATGT ACTTCTTTAT GATTCGCCCA
CAACAAAAGC AACGTAAAGA ACACCAAGAG ATGATGAATG AATTACACCC AGGTGATGAA
GTTGTTACGA TTGGTCGGAT GCATGGTAAG ATTGATTCAA TCAATAAGGC TGATCGGACA
GTTACTTTAG ATTGTGAAGG GATCTACCTT ACTTTTGATA TGGTGGCAAT TGCCCGTGTT
ATCAAACGAG CAGATGCACC AGCTAGTGAA GCTCCCCAAG ATAATAAAGC TGTTGCTAGT
TCTGCAGCTG ACAGTTCTGC AGCTGCTTCA GCAGATAGCG CTGCTAGTGA GCCTGCATCT
GCAGCGAGTG CTAGCGATGA ACAAAAAGAC AGCGAAGAAA AGTAA
 
Protein sequence
MNSLSSFVLG AASSNNASGY SGIILIILMV ALMYFFMIRP QQKQRKEHQE MMNELHPGDE 
VVTIGRMHGK IDSINKADRT VTLDCEGIYL TFDMVAIARV IKRADAPASE APQDNKAVAS
SAADSSAAAS ADSAASEPAS AASASDEQKD SEEK