| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0052 |
|---|
| Symbol | |
|---|
| ID | 5189875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 65035 |
|---|
| End bp | 66213 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640589848 |
|---|
| Product | acetyl-CoA acetyltransferase |
|---|
| Protein accession | YP_001270665 |
|---|
| Protein GI | 148543295 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000000885488 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAGG TTTACATTGT TGCTGCTCAG CGAACACCAA TCGGTAAGTT TAACGGTCAG
TTAGCTTCAA AGTCTGCAGT TGAATTAGGA GCGATTGCAA TTAAAGCGGC TGTTGAAAAG
GCAAAGCTCA GCGAAAACGA TATTGACCAA GTGTTAATGG GGAATGTTAT TCAAGCAGGA
ACGGGACAAA ATCCAGCGCG TCAAGCATCA ATGGCCGCTG GATTAGGTGA GCAGGTTCCG
GCAATAACGA TTAATGACGT CTGTGCGTCG GGAATGTCCA GTGTTGACCT GGCAGCAAGT
TTGATTCGCG CAGGACAGGC TAATGTAATT GTTGCCGGGG GGATGGAAAG TATGTCCCAA
GCTCCATATG TTCTTCCTAA GGCACGGAAT GGCTATCGAT TTGGGAATGG AACCTTGCTT
GATGCGATGC AAAGTGATGC ATTAAATGAT GTTTATGGCG GTTATCCGAT GGGAATTACT
GCTGAAAATA TCAATGATAA GTATCAGATT ACTCGTCACC AACAAGACGA ATTTGCTTTG
ATGAGCCACC AACGTGCGGT AAAGGCTCAA AAAGCAGGCT ATTTCGATTC AGAAATTGTA
CCAGTTGAAG TTAAGCAGAA ACGAACAACA GTGACTGTAA CTGTTGACGA AGCTCCACGA
CCAGATACTT CACTAGCGGC TTTAGCAAAA TTAAAACCAG CTTTTAAATC TGACGGAAGT
GTGACTGCAG GGAATGCCTC GGGAATTAAT GATGGTGGAG CTGCCTTGGT TCTTGCTTCT
GAAAGTGCAG TCAACCGATT AGGATTAACT CCATTGGCTG AGTGGCAAGG ATCTGCAGTT
GTTGGTCTTG ATCCAGCATT GATGGGTTTG GGACCATATT ATGCAATCAA GAAGCTCTTA
AAAAATCAGC AGCTGTCGGC AGATGACGTA GATACTTACG AAATTAATGA GGCGTTTGCG
ACCCAAGCCC TTGTCTGTCA GAACTTGCTT CATCTTGATC CTAGGGCTGT CAATCCTTGG
GGTGGGGCAA TTGCATTAGG CCATCCTGTT GGGTGTTCAG GAGCACGAAT TATCGTCACG
ATGATTAGTG AAATGCATAG GGATAATCAT GAACTCGGCA TTGCTTCGCT GTGTGTCGGG
GGCGGAATGG GTGAAGCGGT TCTGCTTAAG AAAATTTAG
|
|---|
| Protein sequence | MEKVYIVAAQ RTPIGKFNGQ LASKSAVELG AIAIKAAVEK AKLSENDIDQ VLMGNVIQAG
TGQNPARQAS MAAGLGEQVP AITINDVCAS GMSSVDLAAS LIRAGQANVI VAGGMESMSQ
APYVLPKARN GYRFGNGTLL DAMQSDALND VYGGYPMGIT AENINDKYQI TRHQQDEFAL
MSHQRAVKAQ KAGYFDSEIV PVEVKQKRTT VTVTVDEAPR PDTSLAALAK LKPAFKSDGS
VTAGNASGIN DGGAALVLAS ESAVNRLGLT PLAEWQGSAV VGLDPALMGL GPYYAIKKLL
KNQQLSADDV DTYEINEAFA TQALVCQNLL HLDPRAVNPW GGAIALGHPV GCSGARIIVT
MISEMHRDNH ELGIASLCVG GGMGEAVLLK KI
|
|---|
| |