Gene Pput_5127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5127 
Symbol 
ID5192745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5762266 
End bp5762910 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content65% 
IMG OID640589610 
Producthypothetical protein 
Protein accessionYP_001270429 
Protein GI148550327 
COG category[S] Function unknown 
COG ID[COG0586] Uncharacterized membrane-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCAAC AATTCCTGCA GGATTTCGGC TACTTCGCCC TTTTTCTAGG CACCTTCTTT 
GAAGGCGAGA CCATTCTGGT GCTTGCGGGA TTCCTTGCGT TCCGCGGTTA CATGGATATC
AATCTGGTAT GCCTGGTGGC CTTCTTCGGC AGCTACGCGG GCGACCAGTT GTGGTACTTC
ATGGGCCGAC GCCACGGGCG CAGGATCCTG GCGCGCAAGC CGCGCTGGCA GGCAATGGGT
GACCGGGCGC TGGACCACAT CCGTCGCCAC CCCGATATCT GGGTGCTGAG CTTCCGCTTT
GTCTATGGCT TGCGCACGGT CATGCCGGTG GCCATCGGCC TGTCGGGTTA CCCGCCACGT
CGCTACCTGC TGCTGAACGG GATTGGCGCG GGCATCTGGG CAGTGGCCCT GGGCGCCGCC
GCCTACCACT TCGGCGCCAT CCTCGAAGGC TTGCTGGGCA ACGTCAAACG TTACGAGCTA
TGGGTGCTTG GCGGCCTGGT GGCGCTGGGC GGCCTGCTGT GGCTGCGCCG GCGCTTCCGT
ACTCTGCGCG CGGAGCGCAG GGCGGCGAGC CAGGCCCAGC CCCCAGAGGC TGAGCAGGCT
GTAAGCCACG AGCAGAAACC AGGCCAGCGG CGCGACCACC GCTAA
 
Protein sequence
MLQQFLQDFG YFALFLGTFF EGETILVLAG FLAFRGYMDI NLVCLVAFFG SYAGDQLWYF 
MGRRHGRRIL ARKPRWQAMG DRALDHIRRH PDIWVLSFRF VYGLRTVMPV AIGLSGYPPR
RYLLLNGIGA GIWAVALGAA AYHFGAILEG LLGNVKRYEL WVLGGLVALG GLLWLRRRFR
TLRAERRAAS QAQPPEAEQA VSHEQKPGQR RDHR