Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5127 |
Symbol | |
ID | 5192745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5762266 |
End bp | 5762910 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640589610 |
Product | hypothetical protein |
Protein accession | YP_001270429 |
Protein GI | 148550327 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCAAC AATTCCTGCA GGATTTCGGC TACTTCGCCC TTTTTCTAGG CACCTTCTTT GAAGGCGAGA CCATTCTGGT GCTTGCGGGA TTCCTTGCGT TCCGCGGTTA CATGGATATC AATCTGGTAT GCCTGGTGGC CTTCTTCGGC AGCTACGCGG GCGACCAGTT GTGGTACTTC ATGGGCCGAC GCCACGGGCG CAGGATCCTG GCGCGCAAGC CGCGCTGGCA GGCAATGGGT GACCGGGCGC TGGACCACAT CCGTCGCCAC CCCGATATCT GGGTGCTGAG CTTCCGCTTT GTCTATGGCT TGCGCACGGT CATGCCGGTG GCCATCGGCC TGTCGGGTTA CCCGCCACGT CGCTACCTGC TGCTGAACGG GATTGGCGCG GGCATCTGGG CAGTGGCCCT GGGCGCCGCC GCCTACCACT TCGGCGCCAT CCTCGAAGGC TTGCTGGGCA ACGTCAAACG TTACGAGCTA TGGGTGCTTG GCGGCCTGGT GGCGCTGGGC GGCCTGCTGT GGCTGCGCCG GCGCTTCCGT ACTCTGCGCG CGGAGCGCAG GGCGGCGAGC CAGGCCCAGC CCCCAGAGGC TGAGCAGGCT GTAAGCCACG AGCAGAAACC AGGCCAGCGG CGCGACCACC GCTAA
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Protein sequence | MLQQFLQDFG YFALFLGTFF EGETILVLAG FLAFRGYMDI NLVCLVAFFG SYAGDQLWYF MGRRHGRRIL ARKPRWQAMG DRALDHIRRH PDIWVLSFRF VYGLRTVMPV AIGLSGYPPR RYLLLNGIGA GIWAVALGAA AYHFGAILEG LLGNVKRYEL WVLGGLVALG GLLWLRRRFR TLRAERRAAS QAQPPEAEQA VSHEQKPGQR RDHR
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