| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5000 |
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| Symbol | |
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| ID | 5195439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5618843 |
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| End bp | 5619715 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640589485 |
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| Product | putative signal transduction protein |
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| Protein accession | YP_001270304 |
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| Protein GI | 148550202 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1639] Predicted signal transduction protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.415832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCAAG AACTCAGCGC CGAACAGATC CAGCAAGCCT TGCAAGGCAT CACCATCCCG
CCTCAACCGC AAATCATGGT CGATCTGCAG TTCGAGCAGT ACATGCCTGA CCCAGACCTG
GAAACCATCG CCAAGCTGAT TTCCCAGGAC CCGGGCCTCT CTGGCGCCTT GCTCAAGCTG
GTCAACTCTC CGCACTTCGG GTTGTCCAAC AAGATCGGTT CGATCCAGCG TGCGGTAAAC
CTGCTGGGGA GCCGGTCGAT CATCAACCTG ATCAACGCCC AGTCGATCAA GGGCGAGATG
AGTGACGAGA CCATCGTTAC CCTCAACCGC TTCTGGGATA CCGCCCAGGA CGTCGCGATG
ACCTGCCTGA CGCTGGCCAA GCGTACCGGC ATACAGGCGG CGGACGAAGC CTATACCCTT
GGCCTCTTCC ATGACTGTGG CGTGCCGTTG ATGCTCAAGC GCTTCCCCAA TTACATGGAC
GTGCTGGAAG AGGCATACGC CAAGGCCGAC GAAGAAACAC GCGTGGTCGA TACCGAAAAC
CGCACGTTCA ACACCAACCA TTCAGTGGTC GGCTACTTCA CAGCCAAATC CTGGCGCTTG
CCCGAGCACC TCAGTGCGGC CATCGCCAAC CACCACAATG CCTTGGCCGT GTTCCGCGAC
GATACCTCGC GCAATACCCA GAGCCAGCTG AAAAACCTGT TGGCGGTGCT GAAGATGGCC
GAGCATATCT GCGCGTCCTA CCGTGTGCTG GGCAACCAGG CGGTGGACCA CGAATGGAAT
GTGGTCGGCC CGTTGGTGCT CGATTACATT GGTTTGTCGG AATACGATTT CGAAAACCTC
AAGCAGAACA TTCGCGAGTT GGGCGGACAC TGA
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| Protein sequence | MSQELSAEQI QQALQGITIP PQPQIMVDLQ FEQYMPDPDL ETIAKLISQD PGLSGALLKL
VNSPHFGLSN KIGSIQRAVN LLGSRSIINL INAQSIKGEM SDETIVTLNR FWDTAQDVAM
TCLTLAKRTG IQAADEAYTL GLFHDCGVPL MLKRFPNYMD VLEEAYAKAD EETRVVDTEN
RTFNTNHSVV GYFTAKSWRL PEHLSAAIAN HHNALAVFRD DTSRNTQSQL KNLLAVLKMA
EHICASYRVL GNQAVDHEWN VVGPLVLDYI GLSEYDFENL KQNIRELGGH
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