| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4966 |
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| Symbol | |
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| ID | 5193218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5587416 |
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| End bp | 5588414 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640589451 |
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| Product | twitching motility protein |
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| Protein accession | YP_001270270 |
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| Protein GI | 148550168 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGTGA CCGACCTGTT GGCCCGAGCT GTGGATGCGG GGGCTTCAGA CCTGCACCTG
GCGACGGGCC AGATTCCGAT GCTGCGCCTG GATGGCGAGT TGCAGCGTAT GGGCTTGCCG
CCCTTGAGCC AGGGTGCCTT GATCGAGGGC ATGGCGAGCG TGCTGGATGA CGATCAGCGC
CGGCAGTGGG CCCAAGGCGA TGAAATGGAC CTTGCGCTGG AGTTGCCGGC GCTTGGGCGC
TTTCGGCTGA ACCTGTTTCG CCAGTTGAAT GGCCCGGCGG TTACCTTTCG GTTGATTCCG
GGGCGCATTG CGACGGTGAG TGAGCTGGAC CTTGCGGATG TGTTTCAAGC TGTTGCGCAT
TGCCGGGATG GCTTGATCCT CGTGGGCGGG CCGACCGGCA GTGGCAAGTC CAGTACCCTG
GCAACGCTGC TCGACCAGCT GAACCGCGAG CGGGCGCTGC ACATCATTAC CCTGGAAGAC
CCTGTCGAGG TCATCCATGC CAGCCAGCGC AGCCTGGTCA ACCAGCGTGA GATGGGGCGC
CATAGTCGCG GCTTTGCTCA GGGGCTGCGC AGTGCGCTGC GCCAGGACCC GGACGTGATC
ATGATCGGCG AGTTGCGCGA CCTTGAAACC ATTCGCCTGG CCCTGCGCGC GGCCGAAACC
GGGCACCTGG TGCTGGCAAC CGTGCATGCG CGTTCGGCGA CCAGCAGCAT CGACAGGTTG
GTGGAGGTTT TTGCTGCCGA GGAAAAGCCG TTGGTGCGGG CGATGCTGGC CGAGTCACTG
CGCCTGGTGG TCGCGCAGGT GCTGGTCAGG CGCGTGGGGG GCGGGCGGGT GGCTGCGCGG
GAAGTGCTGG TGGCGACGCC GGCGGTGCGT AACCTGGTTC GGGAGGGGCG GTTGGCGCAG
TTGTCTTCGG TGATGCAGGG CGGGGCGGCG GAGGGGATGC TGACGATGGA GGGGGCGTTG
CGGAGGCTGA GGGAGCGAGG GTTGATCAAA GGCTTGTAG
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| Protein sequence | MDVTDLLARA VDAGASDLHL ATGQIPMLRL DGELQRMGLP PLSQGALIEG MASVLDDDQR
RQWAQGDEMD LALELPALGR FRLNLFRQLN GPAVTFRLIP GRIATVSELD LADVFQAVAH
CRDGLILVGG PTGSGKSSTL ATLLDQLNRE RALHIITLED PVEVIHASQR SLVNQREMGR
HSRGFAQGLR SALRQDPDVI MIGELRDLET IRLALRAAET GHLVLATVHA RSATSSIDRL
VEVFAAEEKP LVRAMLAESL RLVVAQVLVR RVGGGRVAAR EVLVATPAVR NLVREGRLAQ
LSSVMQGGAA EGMLTMEGAL RRLRERGLIK GL
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