Gene Pput_4160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4160 
Symbol 
ID5192656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4656286 
End bp4657140 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content64% 
IMG OID640588637 
ProductS-formylglutathione hydrolase 
Protein accessionYP_001269468 
Protein GI148549366 
COG category[R] General function prediction only 
COG ID[COG0627] Predicted esterase 
TIGRFAM ID[TIGR02821] S-formylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.394545 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGG ATAACATCTC CTGCCAGAAG AGCTTCGGCG GCTGGCACAA GCGTTACCGG 
CATCATTCCA AGGTGCTGGG TTGCGATATG GTGTTCGCCG TGTACCTGCC ACCGCAGGCC
GAGCAGGGCG AAAAGCTGCC GGTGCTTTAC TGGCTCAGCG GCCTCACCTG CACCGACGAG
AACTTCATGC AGAAGGCCGG CGCCCAGCGT CTGGCCGCCG AGCTGGGGCT GATCATCGTT
GCCCCCGATA CCAGCCCGCG TGGCGAGCAG GTGCCGGGCG ATCCGGACGG CGCCTGGGAC
TTCGGCCTGG GCGCTGGCTT CTACCTCAAC GCCACCCAGC AACCCTGGGC CCAGCACTAC
CGCATGCACG ACTATGTGGT GGAGGAGTTG CCAGCCCTGA TCGAGGCCCA CTTCCCGGCG
TCGGGCGAGC GCAGCATCAG CGGCCACTCC ATGGGTGGGC ATGGCGCGTT GGTGTGCGCC
TTGCGCAATC CGGGGCGCTA CCGCTCGGTG TCGGCATTCT CGCCAATCAG CAATCCGATG
GATTGTCCGT GGGGCGAGAA AGCCTTCAGC CGCTACCTGG GTGAAGACCG TGGGCGCTGG
CGTGAGTGGG ATGCCAGCGT GCTGCTGGCC GAAACCCCGG CAGGCCAATG CCCGCCGTTG
CTGGTGGATC AGGGCGACCG TGACGACTTC CTCGAGAAGC AACTCAAGCC TGAAGCGCTG
GAACAGGCGG CACGCAAAGG TGGCCATGCA ATGACCCTGC GTATGCAGCC GGGTTATGAC
CATAGCTACT ACTTCATTGC CAGCTTCATC GAGGAGCACC TGCGCCATCA TGCGGTGGCA
CTGGGGCGGG TTTAA
 
Protein sequence
MSLDNISCQK SFGGWHKRYR HHSKVLGCDM VFAVYLPPQA EQGEKLPVLY WLSGLTCTDE 
NFMQKAGAQR LAAELGLIIV APDTSPRGEQ VPGDPDGAWD FGLGAGFYLN ATQQPWAQHY
RMHDYVVEEL PALIEAHFPA SGERSISGHS MGGHGALVCA LRNPGRYRSV SAFSPISNPM
DCPWGEKAFS RYLGEDRGRW REWDASVLLA ETPAGQCPPL LVDQGDRDDF LEKQLKPEAL
EQAARKGGHA MTLRMQPGYD HSYYFIASFI EEHLRHHAVA LGRV