Gene Pput_3957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3957 
Symbol 
ID5190411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4463228 
End bp4463524 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content63% 
IMG OID640588430 
ProductBolA family protein 
Protein accessionYP_001269265 
Protein GI148549163 
COG category[T] Signal transduction mechanisms 
COG ID[COG0271] Stress-induced morphogen (activity unknown) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.533041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0136089 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGC AACAACGTAT CGAACAGCAA CTGGCCGCGC TGGCGCCGCA ACACCTGGAA 
GTGCTCAACG AAAGTCACAT GCACAGTCGT GGTCAGGAGA CCCACTACAA GGCCGTGATC
GTCAGCGAGC AGTTCGCCGG GTTGAACAGC GTCAAGCGCC ACCAGAAGGT GTACGCCACC
ATGGGTGAGC TGATGGGCGA GATCCACGCC CTGGCCATCC ACACCTACAC CGCCGAAGAG
TGGGCCAAGG TCGGCGTTGC ACCGGCCTCG CCCGTGTGTG CGGGCGGCGG GCACTGA
 
Protein sequence
MTMQQRIEQQ LAALAPQHLE VLNESHMHSR GQETHYKAVI VSEQFAGLNS VKRHQKVYAT 
MGELMGEIHA LAIHTYTAEE WAKVGVAPAS PVCAGGGH