Gene Pput_3276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3276 
Symbol 
ID5190819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3684682 
End bp3685848 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content64% 
IMG OID640587723 
Producthypothetical protein 
Protein accessionYP_001268586 
Protein GI148548484 
COG category[S] Function unknown 
COG ID[COG3503] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGTG CCAGCGCTAC GCCCACGCTG ATCACCCAGC GCCTGCAGAG CATCGATGCC 
CTGCGTGGCC TGGTGATCCT GTTCATGCTC CTGGACCACG TCCGCGAGAC TTTCCTCCTG
CACCGCCAGG TCAGCGACCC CATGGCCATT GACACCACGG AACCGGCGCT TTTCTTCAGC
CGCACCCTCG CCCACCTGTG TGCGCCTGTG TTCGTCCTGC TGACCGGCCT GTCGGCCTGG
CTGTATGGCG AGAAGCATCA GGGCCGTGGC GACGTCTCGG CGTTCCTGTT CAAACGCGGG
CTGTTCCTGG TGGTGCTGGA GTTCACCCTG GTCAACTTCG CCTGGACCTT TCAGTTGCCC
CCGAGCGTGA TCTACCTGCA AGTGATCTGG GCCATCGGCG TCAGCATGAT CGCCCTGTCG
CTGCTGGTGT GGCTGCCACG CGCCGCACTG CTCGCCCTGG GCGCCAGCAT CGTCGCCGGC
CACAACCTGC TCGACGGCCT GCACTTTGGC GTGGATTCAG CCCTGCATGT GCCGTGGGCA
ATCCTGCATG ATCGCGGCTG GCTGGCGTTT TCCGAAAACC TGCACCTGCG CACGTCTTAC
CCGGTGCTGC CGTGGATCGG CGTCATCGCC TTGGGTTACG GCCTGGGGCC CTGGTTCGCC
CGCGGCAGCG ATGCCGGGCA ACGCCAGCAA CACCTGCTGG CGGCTGGCTT GCTCGCGCTG
CTTGGCTTTG TCCTGCTGCG CATGGTCAAC GGTTACGGTG AGGCACCGTG GAGCGGTTAC
CCAACCTTCA CGCAAACCCT GATGAGCTTC TTCAACATCA CCAAATACCC ACCGTCGCTG
CTGTTCCTGA CCCTGACCCT GGGCTGCGGC CTGTTGTTGT TACGCGCGTT CGAACGGGCC
GGCCAGGCGC GCTGGATCAC TGCCCTGGCG GTGTTCGGTG CGGCACCGAT GTTCTTCTAC
CTGCTGCACC TGTATGTGCT GAAGCTGCTG TACCTGGCCT GCGTGGCGCT GTTCGGGCTC
AACCATGGCG ACTACTTCGG TTTCGACGGT GTCGCAGCGA TATGGCTGGT CGCAGTACTG
CTGGCGGTTT CGCTGTACCT GCCGGTGCGC GGGTTCGCCC GACTGAAGCA GCGCCGCCGC
GACATCAGCT GGCTGAAGTA CTTCTGA
 
Protein sequence
MTSASATPTL ITQRLQSIDA LRGLVILFML LDHVRETFLL HRQVSDPMAI DTTEPALFFS 
RTLAHLCAPV FVLLTGLSAW LYGEKHQGRG DVSAFLFKRG LFLVVLEFTL VNFAWTFQLP
PSVIYLQVIW AIGVSMIALS LLVWLPRAAL LALGASIVAG HNLLDGLHFG VDSALHVPWA
ILHDRGWLAF SENLHLRTSY PVLPWIGVIA LGYGLGPWFA RGSDAGQRQQ HLLAAGLLAL
LGFVLLRMVN GYGEAPWSGY PTFTQTLMSF FNITKYPPSL LFLTLTLGCG LLLLRAFERA
GQARWITALA VFGAAPMFFY LLHLYVLKLL YLACVALFGL NHGDYFGFDG VAAIWLVAVL
LAVSLYLPVR GFARLKQRRR DISWLKYF