Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3185 |
Symbol | |
ID | 5194622 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3599279 |
End bp | 3600961 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640587629 |
Product | amidohydrolase 3 |
Protein accession | YP_001268495 |
Protein GI | 148548393 |
COG category | [R] General function prediction only |
COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.214251 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.510937 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACCG CCGCAGACCT CATTATTCAC AATGCCCGCA TCTACACGGT CGACCCGCAC AGGCCTTGGG CTGAGGCGGT GGCCATCTGC GGCGAACGCA TCGTTTGCGT GGGCGACCAC GGCAGCGTCA TGGCATACGC CGGCCCTGCC ACACGCCTGC TGGATGCCGG CGGCAAACTG GTGCTGCCGG GCTTCGTCGA GTCTCACTGG CATTTTTCCT GTACCGCCTT TGCCTTTCAG GCGCTGGTCA ACCATACCGA CCCGCTACAG GTGCTGGCCC TGCTCCAGGC CTACGTCGAG GCCAACCCCT GTGAAAAAGC CATTACCGGC ATGGGCTGGA TCCAGCCATT GATGCCTGGG CATATGTTGC GCCGCGAAGT ACTGGATGCC ATCTGTGCGG ACAAGCCCGT GTGCCTGCTG TCCACCGACT ATCACACCAT GTGGGTCAAC AGCTTCGCCC TGAACGCTGC CGGCATCGAC CGCAACACCC CGCCAGTAGA AGAGGGCGCC AGCTGGTTCG AAAAGGACCC GATCACCGGC GAGCCCACGG GTGTGATCAT TGACTGCGCC GCCTATTCGC TGCTGATGCA ACGTCTGAGC GAAGCCGGCT ACCTACCGAC AGGCATCGAC CTGTACCTGC GCTCGATTCC TTTTTGGCAA GAGAAACTGG TGGCGGCCGG GATTACCACG GTATTCGATG CCGGGTTCCT CGACCCCGCT GGCGACCAGT CGCTGCTGTA TGAAACCCTG CAGCAACTGG AGCGTGAGGA GCGCCTGAAA CTGCGGGTGG TCGGCAGCTA CATCAACATG GGCACCGAGG ACGATCCGGT CACGCGGCTG CAGGCCATGC GCGAACGCTA CGACTCGCCG CTGGTCAAGG CGCAGACCCT CAAGCTGATG CTGGACGGGA CCGAGCTGAA CCACACCGCG TTCCTGCTCG AGCCCTATTG CGACAAGCCA CACAGCTGCG GGTCGACGAC CATGCCCGAG GAAGTGTTCG AGGGCCATGT GCGCAAGGCC GACGCCCTCG GTATCGACGT GATGGTGCAT GCAGTGGGCG ATGCCGCCGT GCGCATGGCG CTGGACGTGT TCGAGCGCAC GTTCTCCAGC AATCCGCCCC GCGACCGTCG TCACGTCATC ACTCACGCCT TTCTCACCCA CCCCGACGAC ATACCGCGCT TTCGCCGTAT CGGCGTCATG GCCAACACCC AGTTGCAGTG GGGCGTGGTC GACGCCTACG CCGAGGCCAT CCAGCAGACC TATGGCTACC CACGCTGGGC GTCGATGTAT AAATTCCGCA GCTTCATCGA CCAAGGTGTG ACCGTGTCCA TCGGCATGGA CGGCCTGGTG TGCCAATGCC GATGCCAGCA CAAGCCGGTG GAACACTTCG AATCGGGCCA CACCCGCCAG CTCAGTGGCG AACCCGATGC CCCTGTGATG CCCGATGCCG ACGAGCGCCT GAGTATCCCG CAACTGATCG CCGCCTATAC CCTCAACGGT GCATACCAAC TGGGCCTGGA ACGGGAAATC GGTTCGATCA CCGTTGGCAA GCGTGCCGAC ATCATCGTGC TGGAGCAGGA CCTGTTCGAA CTGGACCGCT ACCAGATCGG CAATACCGAA GTAGCGCTGA CCGTAATGAA CGGCCGCATC ACCCACGACG CAGGTACCCT GCCCCGCGCC TGA
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Protein sequence | MSTAADLIIH NARIYTVDPH RPWAEAVAIC GERIVCVGDH GSVMAYAGPA TRLLDAGGKL VLPGFVESHW HFSCTAFAFQ ALVNHTDPLQ VLALLQAYVE ANPCEKAITG MGWIQPLMPG HMLRREVLDA ICADKPVCLL STDYHTMWVN SFALNAAGID RNTPPVEEGA SWFEKDPITG EPTGVIIDCA AYSLLMQRLS EAGYLPTGID LYLRSIPFWQ EKLVAAGITT VFDAGFLDPA GDQSLLYETL QQLEREERLK LRVVGSYINM GTEDDPVTRL QAMRERYDSP LVKAQTLKLM LDGTELNHTA FLLEPYCDKP HSCGSTTMPE EVFEGHVRKA DALGIDVMVH AVGDAAVRMA LDVFERTFSS NPPRDRRHVI THAFLTHPDD IPRFRRIGVM ANTQLQWGVV DAYAEAIQQT YGYPRWASMY KFRSFIDQGV TVSIGMDGLV CQCRCQHKPV EHFESGHTRQ LSGEPDAPVM PDADERLSIP QLIAAYTLNG AYQLGLEREI GSITVGKRAD IIVLEQDLFE LDRYQIGNTE VALTVMNGRI THDAGTLPRA
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