| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2764 |
|---|
| Symbol | |
|---|
| ID | 5192452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 3141367 |
|---|
| End bp | 3142611 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640587214 |
|---|
| Product | saccharopine dehydrogenase |
|---|
| Protein accession | YP_001268080 |
|---|
| Protein GI | 148547978 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.114818 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAGAAGA ACGTTCTTAT CATTGGTGCA GGAGGTGTCG CCAAGGTGGT GGCCCACAAG
TGCGCGCAGC ATAACGACGA ACTGGGTCGT ATCGCCATCG CGTCACGGAA CATCTCCAAA
TGCCAGGCCA TCATCGACAG CGTCAAGGCC AAGGGTAGCC TCAAGGTACC CGCCGACATC
CAGGCCTTCT CGCTCAATGC CCTCGATGTC GAGGCAACCA AGGCGCTGAT CCGCGAAACC
GAATCGCAGA TCGTGATCAA TGTGGGTTCC GCCTTCCTCA ACATGTCGGT GCTGCGTGCT
TGCATCGATA CGGGTGTCGC CTATCTGGAC ACCGCCATCC ACGAAGAGCC GGGCAAGATC
TGCGAGACCC CACCGTGGTA CGGCAACTAC GAGTGGAAAC ACCTCGAAGA GTGCCAGGCA
AAGAACATTA CCGCCATTCT CGGCGTCGGT TTCGACCCGG GTGTGGTGAA CAGCTACGCC
AAGCTGGCGC AGCAACAGTA TTTCGACAGC ATTGATTCGA TCGATATTCT CGACGTCAAT
GCCGGTTCAC ATGGCAAGTA CTTTGCCACC AACTTCGACC CGGAAATCAA CTTCCGCGAG
TTCACCGGAC AAGTGTGGAG CTGGCAGAAC AGCCAGTGGA CCAGCAACAC CATGTTCGAG
GTCAAGCGTA CCGACGACCT GCCAGTGGTA GGCTCGCAAA ACCTGTACCT GACCGGCCAC
GATGAAGTTC ACTCGATTTC GAAGAACCTC AACGTCCCGA ACGTGCGCTT CTGGATGAGC
TTCGGCGAGC ACTACATCAA CGTGTTCACG GTTTTGAAAA ACCTGGGCCT GCTCAGCGAG
CAACCGGTGA AAACCGCCGA AGGCCTGGAA GTGGTACCGC TGAAAGTGGT CAAGGCTGTA
CTGCCAGACC CGGCCTCGCT GGCCCCTGGC TACACCGGCA AAACCTGCAT CGGCGACCTG
GTCAAAGGCA CCAAGGATGG CCAGCCGCGC GAAGTGTTCA TCTACAACGT GGCCGACCAC
GAAGAAGCCT ACGCCGAGAC CGACAGCCAG GGCATTTCCT ACACCGCCGG CGTACCGCCA
GTGGCTGCCG CCCTGCTGGT AGCCCGTGGC GAGTGGGATG CCAAGCGCAT GGTCAACGTC
GAGGAGCTGC CAGCCGAGCC GTTCCTCAAG GCGCTGGACG TGATGGGCCT GCCGACCCGC
GTCAAAGATG AAAAAGGCGA TCGTCCTTGG GACGCTGAAG CCTAA
|
|---|
| Protein sequence | MKKNVLIIGA GGVAKVVAHK CAQHNDELGR IAIASRNISK CQAIIDSVKA KGSLKVPADI
QAFSLNALDV EATKALIRET ESQIVINVGS AFLNMSVLRA CIDTGVAYLD TAIHEEPGKI
CETPPWYGNY EWKHLEECQA KNITAILGVG FDPGVVNSYA KLAQQQYFDS IDSIDILDVN
AGSHGKYFAT NFDPEINFRE FTGQVWSWQN SQWTSNTMFE VKRTDDLPVV GSQNLYLTGH
DEVHSISKNL NVPNVRFWMS FGEHYINVFT VLKNLGLLSE QPVKTAEGLE VVPLKVVKAV
LPDPASLAPG YTGKTCIGDL VKGTKDGQPR EVFIYNVADH EEAYAETDSQ GISYTAGVPP
VAAALLVARG EWDAKRMVNV EELPAEPFLK ALDVMGLPTR VKDEKGDRPW DAEA
|
|---|
| |