Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2707 |
Symbol | |
ID | 5192204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3083789 |
End bp | 3084817 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640587159 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001268025 |
Protein GI | 148547923 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.529174 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAGCG TATTTGTGAC CGGAGCAACC GGCTTGCTGG GCAACAACCT GGTGCGTGAA TTGGTCGCTT GCGGCTACAC GGTCAAAGGC CTGGTTCGCT CAAAAGCCAA AGGTGAACAG CAGTTCAACA ATCTGCCGGG GGTGGAACTG GTCGTTGGGG ACATGGCCAA GGTCGACGCA TTCGCAGCGT CACTGCAAGG CTGCGATACG GTATTTCACA CAGCCGCGTT CTTCCGCGAT AACTACAAGG GCGGCACCCA CTGGAACGAA CTCGAACAGA TAAACGTGTC GGGTACGCGG CGCCTGCTTG AGCAGGCCTA CGGGGCCGGC ATACGACGGT TCATCCATAC GTCTTCCATT GCTGTGCTCA ACGGCGCACC TGGCACGTCC ATCGAGGAGA ACTGCCTGAG GGCCGACGCC GACGCCGATG ACTACTACCG CAGCAAGATC CTCGCTGACC GTGTCGTATT GTCGTTCCTG GAGAGCCACC CCCAGATGCA TGCCTGTATG GTCCTGCCTG GCTGGATGTG GGGGCCTGGC GACATTGGCC CAACCTCGTC GGGGCAATTG GTCAACGATG TGGTACAGGG CAAGTTGCCC GGGTTGATCC CTGGCAGTTT TTCCATTGTC GATGCCCGTG ATGTGGCATT GGCACACATT GCCGCAGCCA GACATGGGCG CCGAGGTGAG CGCTATCTCG CGGCGGGTCG ACATATGACA ATGCGCGAAC TGATGCCTGT TTTAGGATGC ATCGCGGGCG TCAAGACACC CGCTCGACAA ATACCGCTGC CCTTTCTATA CACCTTGGCG GCTGTGCAGG AGATCTATGC GCGCCTGACC GGCAGACCCA TTCTGCTGAG CATGGCCACG TTGCGTCTAC TGGTACGAGA GCAGGACCGC ACCCGTTTCG ACCACCGCAA GAGTGAACAG GAGCTTGGAC TGAGTTTCCG GGCACTCGAG CTGACAATCG CCGACACCGT GGCGTGGTAC CGTGATCATG GCGGGTTTGA AAAAGGCAGC CGACTGTGA
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Protein sequence | MRSVFVTGAT GLLGNNLVRE LVACGYTVKG LVRSKAKGEQ QFNNLPGVEL VVGDMAKVDA FAASLQGCDT VFHTAAFFRD NYKGGTHWNE LEQINVSGTR RLLEQAYGAG IRRFIHTSSI AVLNGAPGTS IEENCLRADA DADDYYRSKI LADRVVLSFL ESHPQMHACM VLPGWMWGPG DIGPTSSGQL VNDVVQGKLP GLIPGSFSIV DARDVALAHI AAARHGRRGE RYLAAGRHMT MRELMPVLGC IAGVKTPARQ IPLPFLYTLA AVQEIYARLT GRPILLSMAT LRLLVREQDR TRFDHRKSEQ ELGLSFRALE LTIADTVAWY RDHGGFEKGS RL
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