Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2674 |
Symbol | |
ID | 5194458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3055563 |
End bp | 3056843 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640587126 |
Product | major facilitator transporter |
Protein accession | YP_001267992 |
Protein GI | 148547890 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCT ATCTCGTCAG CGCCGAAGAC TCCGGCACCG ACACTGCCAA CAGCATCCCC CGGCGCTATG CCTGGGTCGT CTTCGCCTTG ACCTTCGGCG TGTTGATCTC CGACTACATG TCGCGCCAGG TGCTCAATGC GGTGTTTCCG CTGCTCAAGG GTGAATGGGC ATTGACCGAC AGCCAGTTGG GCTTGCTCAG CGGCATCGTC GCGCTGATGG TCGGCCTGCT GACCTTCCCG TTGTCGCTGC TGGCCGACCG TTTCGGCAGG GTACGCAGCC TGGTGCTGAT GGCCGTGCTG TGGAGCCTGG CCACGCTCGG CTGTGCCCTG GCGGAAAACT ACCCGCAAAT GTTCATTGCG CGCTTTCTGG TCGGGGTCGG CGAGGCCGCC TATGGCAGTG TCGGCATTGC CGTGGTGGTC GCGGTATTCC CCCGCGACAT GCGGTCGACG CTGGCCGGGG CGTTCATGGC GGGCGGCATG TTCGGCTCGG TGCTGGGCAT GGCCTTGGGC GGGGTGTTGG CTCAGCACCT GGGCTGGCGC TGGGCATTTG CCGGCATGGC ATTGTTCGGC CTGGTGCTGG CGATGCTCTA CCCCCTCATC GTCAAAGAGG GGCGCATTGC GCCCAAGTGC GCGCAGCAGG CGCTGGACAA GGCCAGCCAC CCGCTGCGCA CCCTGTATAG CAGCCGTTCG GTCATCGCCG CCTATGTCGG CAGTGGCCTG CAGTTGTTTG TCGGCGGCAC CCTGATCGTG TGGATGCCCA GTTACCTGAA CCGCTATTAC GCCATGGGCA CCGACCGCGC GGGGGCGATC GCCGCCGTCA TCGTGCTGTG CAGTGGTATC GGCATGATTC TCTGCGCCAT GCTCTGCGAT CGCCTTGGGC GGCAGCGCCC GGACCGCAAG ATCAGCCTGG CCATCGGCTA TTGCCTGGGC AGTTGTGCGC TGCTGAGCAT AGCCTTTGCG TTGCCTGCCG GTACCGCACA ACTGGTGCTG ATCTGCGTGG GCATGATGAT CGCCGCCGGC ACCAATGGCC CGTCCAGTGC CATGGTCGCC AACCTGACCC ACGCCGCTGT GCATGGCACG GCATTCGCCA CCCTGACCTT GGCCAACAAC CTGCTGGGCC TGGCCACCGG GCCGCTGATC ACCGGTCGGG TGTCTGACCT GATCGGGCTT CAGGCGGCGC TGCAGTGGGT GCCACTGATA AGCATTGCAG CGGCGGCTGT GTTCTGGGTT GCCAAACGTC ACTACCACCG CGACATGGAT CGTCTGCGCT GCAGGAGTTG A
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Protein sequence | MATYLVSAED SGTDTANSIP RRYAWVVFAL TFGVLISDYM SRQVLNAVFP LLKGEWALTD SQLGLLSGIV ALMVGLLTFP LSLLADRFGR VRSLVLMAVL WSLATLGCAL AENYPQMFIA RFLVGVGEAA YGSVGIAVVV AVFPRDMRST LAGAFMAGGM FGSVLGMALG GVLAQHLGWR WAFAGMALFG LVLAMLYPLI VKEGRIAPKC AQQALDKASH PLRTLYSSRS VIAAYVGSGL QLFVGGTLIV WMPSYLNRYY AMGTDRAGAI AAVIVLCSGI GMILCAMLCD RLGRQRPDRK ISLAIGYCLG SCALLSIAFA LPAGTAQLVL ICVGMMIAAG TNGPSSAMVA NLTHAAVHGT AFATLTLANN LLGLATGPLI TGRVSDLIGL QAALQWVPLI SIAAAAVFWV AKRHYHRDMD RLRCRS
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