| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2416 |
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| Symbol | |
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| ID | 5195090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2761950 |
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| End bp | 2763266 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640586873 |
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| Product | sodium:dicarboxylate symporter |
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| Protein accession | YP_001267739 |
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| Protein GI | 148547637 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.236956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGA CTAGTCTGGT GACTAGAATT ATTGCAGGTC TTGTGCTCGG GGTTGTAGTG
GGGGCACTTC TCAATTTCTT TCCCGAGTAT AAAGCCTGGA TAATCAGCAG CCTTTTACAA
CCCGTCGGCG ACATTTTCAT CAAGATGATG AAGATGATTG TCGTACCCCT CGTATTCGCG
TGCATGGTCG GCGCGATCGC AGGCAATGGT GATAGCAAGG CGATAGGGCG GGTCGGGGTG
AAAGCCCTGT TCTACTTCTT CGTCGTGACC AGCATCGCAA TTGTGTGTGG CCTGCTGGTT
GGCAATCTTG CGCAGCCAGG CGTAGGTGCC AACTTGACGA CCCTGGCAAA CACCCAAACG
CTCTCGCTTC CGTCTACCTC GGAGAACACT GGGTTTGGTC AAGTCATCCT CAACATCATC
CCGGACAATA TCGTCGGTGT AATGGCGCAA GGAAAGCTGC TGCCTGTCCT GTTCTTCTCG
GTCATGTTCG GCTTTGGACT AAGTGCTCTG GACAAAGAGA AGAAAATGCC GTTGATCGCG
GTAGTCAATG CCATTTCCGC GACGATGTTC AAGGTGACGC ATATCGTGAT GCACTACTCA
CCCATCGGGA TCTTTGGCCT GATCGGCGTG ACGGTCGCCA ACTTCGGGCT TTCCGCGTTG
CTGCCTCTGG CAAAACTGAT TGCCGTCACC TATGTCGCGG TCATTCTGTT CGGCGTGGTT
GTGCTGGGCG GCATCGCGAA GGTTGCAGGG ATCAACATCT TCGACCTGAT CAAGGCGATC
AAGGATGAGT TGATCCTGGC GTTCAGTACC GCCGCCTCGG CGACTGTCAT GCCCCAGCTG
ATTGAAAAGG TCGAGGCCTA CGGTGCGCCG CGTTCGATTG CTACGTTGGT TATCCCTACG
GGTTATTCCT TCAATCTGGA TGGCGCATCG CTGTTCGTGG GCATCGGCAC GCTGTTCATC
GCGCAGCTCT ATGAGATTCC CCTGAGCTTG GCTGACCAGG CGATGCTGAT CATCATCATG
GTGCTGACCT CCAAGGGCGC AGCCGGCGTC CCGGGTGCCA TGTTCGTCAT CTTGACCGCT
ACGCTGACCA GTGCCGGTCT GCCGGTGGAA GGTATTGCGT TCATCGCCGG AGTCTATCGC
TTGATGGACA TGCCGATCAC GGCGCTGAAT GTCTTAGGCA ACGCACTGGC GCCTCTGGTT
GTGGCGAAGT GGGAGAACCA ATACCGGATG CCTGCTGCCC CGGTGGTAGC GCCCGAGGAG
CGCCCGCAAG TGTTGACCTC TTCAATTAGC GCTGGGAGCT CGGCAAACGC GACCTAG
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| Protein sequence | MAKTSLVTRI IAGLVLGVVV GALLNFFPEY KAWIISSLLQ PVGDIFIKMM KMIVVPLVFA
CMVGAIAGNG DSKAIGRVGV KALFYFFVVT SIAIVCGLLV GNLAQPGVGA NLTTLANTQT
LSLPSTSENT GFGQVILNII PDNIVGVMAQ GKLLPVLFFS VMFGFGLSAL DKEKKMPLIA
VVNAISATMF KVTHIVMHYS PIGIFGLIGV TVANFGLSAL LPLAKLIAVT YVAVILFGVV
VLGGIAKVAG INIFDLIKAI KDELILAFST AASATVMPQL IEKVEAYGAP RSIATLVIPT
GYSFNLDGAS LFVGIGTLFI AQLYEIPLSL ADQAMLIIIM VLTSKGAAGV PGAMFVILTA
TLTSAGLPVE GIAFIAGVYR LMDMPITALN VLGNALAPLV VAKWENQYRM PAAPVVAPEE
RPQVLTSSIS AGSSANAT
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