| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2199 |
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| Symbol | |
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| ID | 5193755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2500867 |
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| End bp | 2501607 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586656 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001267522 |
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| Protein GI | 148547420 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.34353 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGT ACCTGCAAGG CCAAACCGCT ATCGTCACCG GTGGCATGCG TGGCATCGGC
CTGGCGATTG CCCGCCGCTT GCATGTCGCC GGCGCCCAGG TGGTGATCTG GGACCTTGCC
GTCGATGGCT GGAACAGCAC GGAAAACGGC TTCGAGCCGG TGCTGCGCCA GGCAGTGGAT
GTGTCGTCGC TGGTCTCGGT GGAGGCGGCT TTTGCCCAGA CGCTGGCGCG TTTGGGGCAG
GTGCAGGTCT TGGTCAACAA TGCCGGCATC AACGGTCCGG TGGTGGCGTC TTGGGAGTAC
CCGCCAGACG CCTGGGACAA GGTCATCGCC ATTGACCTGA ACGGTGTGTT CTATTGCTGC
CGCACCGCCA TCGCGCACAT GCGTGAGCGC GGCTACGGGC GCATCGTCAA TATCGCCTCC
ATGGCCGGCA AGGAGGGTGT GCAGTACATC TCGGGCTATT CGGCAGCCAA GGCCGGGGTC
ATCGCCTTCA CCAAGGCGGC AGCCAAGGAG CTGGCGCAGG ATGGCGTGCT GCTCAACTGT
GTGGCACCGG CGATGGTCGA GACGCCGCTG ATGGCCGAGA TGACGGCCGA GCATATTGCC
GCGAGCAAGG CCAAGATCCC CATGGGGCGC TTCCTCAAGG CCGAGGAGAT CGCCAACATG
GTCAGCTGGA TCGCCGGGCC TGAGTGCAGC TTTACCACTG GCTTTGTGTT TGACCTCAGC
GGCGGGAGGG CGACCTACTG A
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| Protein sequence | MSQYLQGQTA IVTGGMRGIG LAIARRLHVA GAQVVIWDLA VDGWNSTENG FEPVLRQAVD
VSSLVSVEAA FAQTLARLGQ VQVLVNNAGI NGPVVASWEY PPDAWDKVIA IDLNGVFYCC
RTAIAHMRER GYGRIVNIAS MAGKEGVQYI SGYSAAKAGV IAFTKAAAKE LAQDGVLLNC
VAPAMVETPL MAEMTAEHIA ASKAKIPMGR FLKAEEIANM VSWIAGPECS FTTGFVFDLS
GGRATY
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