Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2013 |
Symbol | |
ID | 5193992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2275318 |
End bp | 2276814 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640586471 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001267337 |
Protein GI | 148547235 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACAAGCC CTGAGTCGCA GCCGATCCGC TATCCTGAGC AATCCTCCGC TCCGGACCCG CCCATGGAAC TGCACATTCG CCTGGAGGGC CGCAAAGGCC TGGCCGACCA GCTTTACCAG CAACTGCGCG ACGGTATCGA CAGCGGCCAC CTGGCCGCCG GTACCCAACT GCCGCCCACC CGTCTGCTGG CTGAGCAACT GGGCGTATCG CGCAAGACAG TGGCCGAGGC CTATTCGCGG CTGACCTACG ATAACCTGCT CAGCGGCGTG GTCGGCCGTG GCACATTCGT CACCCCGCGC CATCCGCTGC GCAGTAACGA ATCAGCCACC ATACCCCTGG CTGGCGCCGC CTCCCTCGAG CGCTGGCAGC AGCGCGCCAC CGTGCTCAGC CAACGCCAGG TGCAGGCGCC ATCGCGCTAT GACTTCGTCG GTGGTGCTTC GAGCAAGGCA CAGTTCCCCT TCGACCAGTG GCGCAGTTGC CTGAACTACG CACTGCGCCG CAGCCAGCGC CACCCCGAGC GCCAATTCCC GGCCCAGGGC TTGCCGGAAC TGCGCGAAGC CATTGCCCAC CACATCGCCT ACTCGCGCGG GGTGCACTGC AGCGCAGCCG ACCTGCTGGT GTGCAACGGC GCCCAGCAGG CGCTGGACCT GATCGCCCGA GTGCTGGTCG AACCGGGCTG CCAGGTGGCC ATGGAAGATC CTGGCTACCC GCCGGCACGG CAATTGTTCC TGGCCCTGGG GGCACGCCTG CAATCGGTGC CGGTGGACGA TGAGGGCCTG TGCGTGGAAC AGATCGCCGA CGGCACCCGG CTGATCTACG TCACCCCCTC GCACCAGTTC CCGCTGGGCA TGCCGATGAG CGAGCCACGC CGGCATGCCC TGCTTGCGCG CGCCGCCGAG CTGGGTGCAC TGATCATCGA AGACGACTAC GACTGTGAGT TCCGCTACCA TGGGCCAGCC TCGGACGCGC TGCAGCGTCT GGACCGGCAT GGGCTGGTCG CCTATGTCGG GACCTTCTCC AAGACTTTGC TGCCCGAGCT GCGCCTGGGC TATGCCGTAT TACCGCCTGC CGTACTGCAG GCCGCTTGCG TGGCCAAGCA CCTTAGCGAT TGGCACAGCC CTACCCTGCT GCAGTGGGCG CTGGCGCGCT TCCTTGGCGA AGGCCACCTG AACAAGCACA TCCGCCGCTG CCACGAGGTC TACAGCGCAC GCCGCGAGCG CATCCTGGCG CGCCTTGGCG GCGATCTGGC ACCGTGGTTC AGCGCCATCC CCGCCAGCGC AGGCTTCCAC CTCAGTGCCT TGGCTACCCC CGCAGTGGAT GTGGAACTGT TGGCCAACCT CGCGCGCAAG GTAGAGGTCG GCCTGTATTC ACTGGCCCCC TTCTTCAGCG AGGCGCCGGT CCGCCCGGGG CTATTGATGG GCTTCGGCGC CATCGAACTG CTGGACATCG ACCCGGCGCT GGACCGGGTA CGCGATACCC TGCAACGCCT CAGTTGA
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Protein sequence | MTSPESQPIR YPEQSSAPDP PMELHIRLEG RKGLADQLYQ QLRDGIDSGH LAAGTQLPPT RLLAEQLGVS RKTVAEAYSR LTYDNLLSGV VGRGTFVTPR HPLRSNESAT IPLAGAASLE RWQQRATVLS QRQVQAPSRY DFVGGASSKA QFPFDQWRSC LNYALRRSQR HPERQFPAQG LPELREAIAH HIAYSRGVHC SAADLLVCNG AQQALDLIAR VLVEPGCQVA MEDPGYPPAR QLFLALGARL QSVPVDDEGL CVEQIADGTR LIYVTPSHQF PLGMPMSEPR RHALLARAAE LGALIIEDDY DCEFRYHGPA SDALQRLDRH GLVAYVGTFS KTLLPELRLG YAVLPPAVLQ AACVAKHLSD WHSPTLLQWA LARFLGEGHL NKHIRRCHEV YSARRERILA RLGGDLAPWF SAIPASAGFH LSALATPAVD VELLANLARK VEVGLYSLAP FFSEAPVRPG LLMGFGAIEL LDIDPALDRV RDTLQRLS
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