| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1898 |
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| Symbol | |
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| ID | 5194050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2173993 |
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| End bp | 2175285 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640586362 |
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| Product | outer membrane porin |
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| Protein accession | YP_001267230 |
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| Protein GI | 148547128 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000146891 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGGTT TCACTGCGCC GCGTTTTTCT TCGTCTGCAC GCCTGGCCGG CGGTTGTATT
GCCGCCGCTT TGTGTGCAGA GGCCACGGCA GAAGAGGCCG GTTTCATCGA AGGTGCCCGC
GCCACGCTGC AGGCGCGCAA TTACTTCTTC AGCCGCGACT ATGCCGATAT CAAGGGCGCC
AGCACCCAGT CGCGTACCCA GGAATGGGCG CAGGGGTTTA CCCTCAATGC CAGCTCCGGT
TATACCCAGG GCACCGTTGG CGTGGGTGTG GATGTTACCG GCCTGCTGGG TTTCAAGCTC
GACAGCAGCC CGGAACATGC CCGGTCCGGG TTGCTGCCCA GCCTGGACAG CGGCAAGTCG
GCGGACGAAT ACAGCCGCCT GGGTGCGGCG ATCAAGTTCA AGGTGTCGCA AACCGAGCTG
AAGGTGGGCG AGTTGATGCC CAACCTGCCG GTGCTGCTGT TCAGCGATTT GCGCCTGCTG
CCGCCGACTT ACCAGGGCGC GATGCTGGAG TCGCGCGAGT TCGCCGGGTT GACCCTGAGC
GCCGGGCAGT TCCGCTCCAC CAGCCTGCGC GACTCGTCCA ACAGCCAGAA GATGTACGCG
CTGGTCAACG ATCCGATCAA CCCGGCGCGG CTGGCGCGCT TTACCAGCGA CCGGTTCAAC
TACGTGGGTG CCGACTATGC CTTCAACGAC AACCGTACCA GCGTCGGTGT CTGGCAGGCG
CAGTTGGAGG ATATCTACCA GCAGCGCTTC TACAGCTTCA AGCATGCCGA GCCGATCGGG
GGCTGGACGC TGGAGGTCAA TGCCGGCTAC TTCGATGCCC GCGAGGACGG GAGCAAGGTG
GCTGGCGACT ACGATAACCA TGCGCTGTTC AGCCTGTTCT CGGCCAAGAC CGGCGGGCAT
ACCTTTTATG TGGGCTATCA GCAGATCGGC GGCGATGACG GCTTTATCCA GGTAGGCGCC
AACACCAACC CGATGGGTAA TACGCTGCCG ACCTATGAGT TCTCGGCACC GGGTGAACGC
TCGTGGCAGG TGCGCCATGA TTACAATTTT GTCGCGTTGG GGCTTCCGGG GCTGACGTCG
ACCCTGCGTT ATGTAAAGGG GCGGGACGTG GACACAGGGC TGGGCTTTGA AGGGCGTGAC
CGCGAGCGTG ACCTAGACCT GGCCTACGTG GTGCAAAGCG GGCCGTTGGC CGGGCTTGGG
ATACGGGTGC GCAACGTGAT GGCGCGCTCC AACTACCGGA CAGATATCGA TGAGAACCGC
TTGATTCTGA GTTACACGAT CAAGGTGTTC TGA
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| Protein sequence | MQGFTAPRFS SSARLAGGCI AAALCAEATA EEAGFIEGAR ATLQARNYFF SRDYADIKGA
STQSRTQEWA QGFTLNASSG YTQGTVGVGV DVTGLLGFKL DSSPEHARSG LLPSLDSGKS
ADEYSRLGAA IKFKVSQTEL KVGELMPNLP VLLFSDLRLL PPTYQGAMLE SREFAGLTLS
AGQFRSTSLR DSSNSQKMYA LVNDPINPAR LARFTSDRFN YVGADYAFND NRTSVGVWQA
QLEDIYQQRF YSFKHAEPIG GWTLEVNAGY FDAREDGSKV AGDYDNHALF SLFSAKTGGH
TFYVGYQQIG GDDGFIQVGA NTNPMGNTLP TYEFSAPGER SWQVRHDYNF VALGLPGLTS
TLRYVKGRDV DTGLGFEGRD RERDLDLAYV VQSGPLAGLG IRVRNVMARS NYRTDIDENR
LILSYTIKVF
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