| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1845 |
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| Symbol | |
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| ID | 5193960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2115513 |
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| End bp | 2116391 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640586313 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001267181 |
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| Protein GI | 148547079 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00465511 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGTCGC CAGTCAGGCC TTCGCTCAAT GCCCTACGAG CGTTTGAAAT GATCGCGCGC
AAAGGATCGT TCAGCGATGC AGCGGATGCT CTGTGCGTGA CTCACGGGGC TATCAGCCGT
CATGTTCGAA GCCTGGAAGA CGCCCTAGGT GTAATTTTGC TGACCCGAAA TGCACATGGC
ACCAAACTCA CTCCAGAGGG AGCACGCCTC GCCTCAGGCT TGGCCAGGGC TTTTGCCTTG
ATACAAGAAA GCATTGATGA AGTTCGCCCT CGCCCGCTTG AGCTCTCCTG CTCGGCGTCG
ATCATGATGC ATTGGCTGCT ACCTCGACTC GCCAAGCTCC ACAGCAGCTT TCCCACCATG
GAATTAGGCT TGAAAACGGG TCACGGCCCC ATTGATTTCG CCCACGAAGG CGTCAGCGTA
GCGATACGCC TCGACAGCAT CGAACCACCT CCAGGGATCG AGCCGATACC CTTAACCAAC
GAATGGGTAG GTGCGATCTG TTCGCCTGCT TATCTGGCTG CGTCCGGCGT CACAGAGGTG
AGCGACTTAA CCAAGGAACG CTTGCTAACC ACAAAAACCC GTCCCCACGC GTGGAAGGAC
TGGTATGCGT CTATTGAGCA AGAACCTGGT GAGCTGCTTG AGATGGAGTT TTTCGAGCAC
TTCTATTTAC TCATTCAGGC AGCCAAGCTC GGCTTGGGGT TCGCCTGTGT CCCACGCATG
CTGGTGGAGG CAGAGCTTGA GAGTGGCGCC TTGTTGGCCC CGTTTGGCTT TGCACAAGGG
GCGGCAAAGT TGGTTCTGTG GGTTTCACCC AATGCAAGGC TACGCCCCGA TACAGCAGAT
TTGGAAAAGT GGATAAAAAA AGAGATGGCG CAAAGCTAG
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| Protein sequence | MTSPVRPSLN ALRAFEMIAR KGSFSDAADA LCVTHGAISR HVRSLEDALG VILLTRNAHG
TKLTPEGARL ASGLARAFAL IQESIDEVRP RPLELSCSAS IMMHWLLPRL AKLHSSFPTM
ELGLKTGHGP IDFAHEGVSV AIRLDSIEPP PGIEPIPLTN EWVGAICSPA YLAASGVTEV
SDLTKERLLT TKTRPHAWKD WYASIEQEPG ELLEMEFFEH FYLLIQAAKL GLGFACVPRM
LVEAELESGA LLAPFGFAQG AAKLVLWVSP NARLRPDTAD LEKWIKKEMA QS
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