Gene Pput_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_1458 
Symbol 
ID5195199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp1637904 
End bp1638371 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content60% 
IMG OID640585929 
ProductFlgN family protein 
Protein accessionYP_001266800 
Protein GI148546698 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3418] Flagellar biosynthesis/type III secretory pathway chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.327454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGACA CCACCTTGCT GCAACTGATC GAAGATGACA TTGCCCCGAT GCAGGAACTG 
CTCGACCTTC TGCAGAAGGA GTCTGTAGCC CTGCATGGCC GCGATATGGC GCCACTGGAA
AATATCCTGG CCCGCAAGCA GTCTTTGATC GTGTTGCTGG AGCAGCAAGG CCTGCGGCGC
AACAACCTGC TCACCAGCCT TGGCCTGAGC GCAGATCGCG CCGGCGTGGA GGCTGTGGCG
GCCCAATCGC CTAACGGTGA ATTGATCCTG CAACAACTGG ACGTGATCAG CCAGTTGATG
CAAGCCTGCC AACAGCTTAA CGAAACCAAT GGCCGGATCA TCCAGGTGCA GCAACACGTC
ACCAACAACC AGATCCGGAT CCTCATGGGC GGCGACTCGC CTTCGCTCTA CGACAGCCGT
GGCAGCACCT CGCCGCTGGC CAAGCCGCGC GCGCTCAGCC AAGTGTGA
 
Protein sequence
MHDTTLLQLI EDDIAPMQEL LDLLQKESVA LHGRDMAPLE NILARKQSLI VLLEQQGLRR 
NNLLTSLGLS ADRAGVEAVA AQSPNGELIL QQLDVISQLM QACQQLNETN GRIIQVQQHV
TNNQIRILMG GDSPSLYDSR GSTSPLAKPR ALSQV